FFCP PHASE1:Hg19::chr18:26736800..26736811,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:26736800..26736811,+ | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr18:26736800..26736811,+ | |||
|id=chr18:26736800..26736811,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.94e-30!43;CL:0002368!1.08e-29!13;CL:0000223!2.61e-23!59;CL:0000244!5.54e-21!4;CL:0000731!5.54e-21!4;CL:0000066!3.02e-18!254;CL:0002621!4.45e-16!3;CL:0002328!3.27e-15!3;CL:0002159!1.24e-13!13;CL:0002202!1.51e-13!9;CL:0002632!1.51e-13!9;CL:0002251!7.75e-11!21;CL:0000317!9.55e-11!2;CL:1000448!9.55e-11!2;CL:0002308!9.55e-11!2;CL:0002140!9.55e-11!2;CL:0002077!1.23e-10!33;CL:0000220!1.67e-10!246;CL:0002321!2.28e-10!248;CL:0000362!3.00e-10!8;CL:0000240!3.43e-08!6;CL:0000311!3.43e-08!6;CL:0000079!3.43e-08!6;CL:0000237!3.43e-08!6;CL:0000036!3.43e-08!6;CL:0000357!3.43e-08!6;CL:0000114!3.43e-08!6;CL:0002166!5.09e-08!3;CL:0000068!1.14e-07!3;CL:0000069!1.14e-07!3;CL:0000307!1.14e-07!3;CL:0000377!1.14e-07!3;CL:0000076!1.69e-07!62;CL:0000221!2.89e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000244;4.02e-35;4!CL:0000731;4.02e-35;4!CL:0002621;1.66e-26;3!CL:0002076;6.67e-26;42!CL:0002368;1.40e-23;13!CL:0002251;4.23e-15;20!CL:0000240;1.23e-13;6!CL:0000311;1.23e-13;6!CL:0000079;1.23e-13;6!CL:0000237;1.23e-13;6!CL:0002166;5.51e-13;3!CL:0000307;2.83e-12;3!CL:0002159;2.17e-10;14!CL:0002336;7.88e-10;1!CL:0002261;7.88e-10;1!CL:0002170;7.88e-10;1!CL:0002202;4.70e-09;9!CL:0002632;4.70e-09;9!CL:0000312;5.59e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.38e-35,4;CL:0000731,3.38e-35,4;CL:0002076,1.11e-32,42;CL:0002621,1.12e-26,3;CL:0002368,1.10e-23,13;CL:0000223,4.43e-23,58;CL:0002251,4.18e-15,20;CL:0000066,6.89e-15,253;CL:0000240,1.59e-13,6;CL:0000311,1.59e-13,6;CL:0000079,1.59e-13,6;CL:0000237,1.59e-13,6;CL:0000036,1.59e-13,6;CL:0000357,1.59e-13,6;CL:0000114,1.59e-13,6;CL:0002166,5.85e-13,3;CL:0000068,2.38e-12,3;CL:0000069,2.38e-12,3;CL:0000307,2.38e-12,3;CL:0000377,2.38e-12,3;CL:0002159,2.31e-10,14;CL:0002336,1.17e-09,1;CL:0002261,1.17e-09,1;CL:0002170,1.17e-09,1;CL:0002202,4.03e-09,9;CL:0002632,4.03e-09,9;CL:0000312,5.89e-08,5;CL:0002321,4.24e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.23e-13;6!CL:0000114;1.23e-13;6!CL:0000223;7.26e-13;58!CL:0000377;2.83e-12;3 | |||
|ontology_enrichment_disease=DOID:1749!4.28e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.93e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.62e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000365!2.33e-25!5;UBERON:0005910!4.21e-21!6;UBERON:0001949!4.45e-16!3;UBERON:0003729!4.48e-16!5;UBERON:0004815!3.27e-15!3;UBERON:0002031!3.27e-15!3;UBERON:0001004!3.85e-14!72;UBERON:0003343!9.21e-12!4;UBERON:0004785!9.21e-12!4;UBERON:0002185!1.54e-11!4;UBERON:0004119!1.71e-11!169;UBERON:0000925!1.71e-11!169;UBERON:0006595!1.71e-11!169;UBERON:0002419!9.55e-11!2;UBERON:0007771!9.55e-11!2;UBERON:0003297!9.55e-11!2;UBERON:0001821!9.55e-11!2;UBERON:0003487!9.55e-11!2;UBERON:0001820!9.55e-11!2;UBERON:0005089!9.55e-11!2;UBERON:0005088!9.55e-11!2;UBERON:0000344!4.68e-10!12;UBERON:0000065!3.39e-09!53;UBERON:0005911!6.76e-09!82;UBERON:0007196!1.28e-08!14;UBERON:0001558!1.28e-08!14;UBERON:0000166!4.32e-08!21;UBERON:0000161!5.49e-08!35;UBERON:0000165!6.82e-08!28;UBERON:0000930!6.82e-08!28;UBERON:0004807!9.01e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.12e-34;12!UBERON:0000365;3.58e-28;5!UBERON:0001949;1.66e-26;3!UBERON:0005910;1.56e-23;6!UBERON:0003729;1.96e-23;13!UBERON:0000344;4.23e-15;20!UBERON:0003929;1.03e-11;7!UBERON:0000161;2.75e-11;19!UBERON:0000166;2.75e-11;19!UBERON:0005911;3.38e-11;36!UBERON:0000165;1.16e-10;28!UBERON:0003350;2.58e-10;8!UBERON:0001828;2.58e-10;8!UBERON:0001708;5.80e-10;4!UBERON:0008895;5.80e-10;4!UBERON:0003343;1.20e-09;4!UBERON:0004785;1.20e-09;4!UBERON:0011159;3.87e-08;5!UBERON:0001004;1.91e-07;65!UBERON:0010371;6.88e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.12e-28,5;UBERON:0001949,1.12e-26,3;UBERON:0005910,1.39e-23,6;UBERON:0003729,1.93e-23,13;UBERON:0000344,4.18e-15,20;UBERON:0004119,9.74e-13,160;UBERON:0000925,9.74e-13,160;UBERON:0006595,9.74e-13,160;UBERON:0001004,1.95e-12,74;UBERON:0003350,2.23e-10,8;UBERON:0001828,2.23e-10,8;UBERON:0000165,2.77e-10,29;UBERON:0000930,2.77e-10,29;UBERON:0001708,6.07e-10,4;UBERON:0008895,6.07e-10,4;UBERON:0000166,9.06e-10,22;UBERON:0003343,1.17e-09,4;UBERON:0004785,1.17e-09,4;UBERON:0000033,6.21e-09,56;UBERON:0003102,6.64e-09,99;UBERON:0000161,2.60e-08,36;UBERON:0011159,4.01e-08,5;UBERON:0000153,5.72e-08,62;UBERON:0007811,5.72e-08,62;UBERON:0005911,2.42e-07,82;UBERON:0000065,3.88e-07,54;UBERON:0010188,6.65e-07,6;UBERON:0002539,6.65e-07,6;UBERON:0008816,6.65e-07,6 | |||
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|short_description=p@chr18:26736800..26736811,+ | |||
}} | }} |
Latest revision as of 00:15, 26 July 2015
Short description: | p@chr18:26736800..26736811, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:26736800..26736811, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.12e-28 | 5 |
gingival epithelium | 1.12e-26 | 3 |
transitional epithelium | 1.39e-23 | 6 |
mouth mucosa | 1.93e-23 | 13 |
mucosa | 4.18e-15 | 20 |
endoderm-derived structure | 9.74e-13 | 160 |
endoderm | 9.74e-13 | 160 |
presumptive endoderm | 9.74e-13 | 160 |
respiratory system | 1.95e-12 | 74 |
epithelium of mucosa | 2.23e-10 | 8 |
gingiva | 2.23e-10 | 8 |
mouth | 2.77e-10 | 29 |
stomodeum | 2.77e-10 | 29 |
jaw skeleton | 6.07e-10 | 4 |
splanchnocranium | 6.07e-10 | 4 |
oral opening | 9.06e-10 | 22 |
mucosa of oral region | 1.17e-09 | 4 |
respiratory system mucosa | 1.17e-09 | 4 |
head | 6.21e-09 | 56 |
surface structure | 6.64e-09 | 99 |
orifice | 2.60e-08 | 36 |
primary subdivision of cranial skeletal system | 4.01e-08 | 5 |
anterior region of body | 5.72e-08 | 62 |
craniocervical region | 5.72e-08 | 62 |
endo-epithelium | 2.42e-07 | 82 |
respiratory tract | 3.88e-07 | 54 |
protuberance | 6.65e-07 | 6 |
pharyngeal arch | 6.65e-07 | 6 |
embryonic head | 6.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.62e-10 | 14 |