FFCP PHASE1:Hg19::chr18:30792468..30792481,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:30792468..30792481,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr18:30792468..30792481,- | |||
|id=chr18:30792468..30792481,- | |||
|ontology_enrichment_celltype=CL:0002553!7.13e-15!1;CL:0002253!3.56e-08!2;CL:0000242!4.09e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.21e-40;1!CL:0002253;3.11e-21;2!CL:0000123;4.66e-21;2!CL:0000242;4.66e-21;2!CL:0002563;2.53e-11;4!CL:0000082;2.26e-09;19!CL:0000312;2.97e-09;5!CL:0000240;6.34e-08;6!CL:0000311;6.34e-08;6!CL:0000079;6.34e-08;6!CL:0000237;6.34e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.21e-40,1;CL:0002253,3.11e-21,2;CL:0000242,4.66e-21,2;CL:0002563,2.53e-11,4;CL:0000082,2.26e-09,19;CL:0000312,2.97e-09,5;CL:0000240,6.34e-08,6;CL:0000311,6.34e-08,6;CL:0000079,6.34e-08,6;CL:0000237,6.34e-08,6;CL:0000036,6.34e-08,6;CL:0000357,6.34e-08,6;CL:0000114,6.34e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.34e-08;6!CL:0000114;6.34e-08;6 | |||
|ontology_enrichment_disease=DOID:3119!2.91e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.34e-11;15!DOID:5409;2.80e-11;4!DOID:0050615;6.14e-11;16!DOID:1115;6.69e-09;20!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.34e-11,15;DOID:5409,2.80e-11,4;DOID:0050615,6.14e-11,16;DOID:1115,6.69e-09,20;DOID:0050687,1.55e-07,143;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000002!1.10e-09!6;UBERON:0001560!1.10e-09!6;UBERON:0003127!9.19e-08!2;UBERON:0001046!7.64e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.53e-11;4!UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0004907;2.53e-09;5!UBERON:0005911;3.98e-09;36!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,2.53e-11,4;UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0004802,2.26e-09,19;UBERON:0000115,2.26e-09,19;UBERON:0004907,2.53e-09,5;UBERON:0002048,3.15e-08,22;UBERON:0000117,3.15e-08,22;UBERON:0000171,3.15e-08,22;UBERON:0000170,3.15e-08,22;UBERON:0005597,3.15e-08,22;UBERON:0000118,3.15e-08,22 | |||
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|short_description=p@chr18:30792468..30792481,- | |||
}} | }} |
Latest revision as of 00:26, 26 July 2015
Short description: | p@chr18:30792468..30792481, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:30792468..30792481, - |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.21e-40 | 1 |
epithelial cell of large intestine | 3.11e-21 | 2 |
Merkel cell | 4.66e-21 | 2 |
intestinal epithelial cell | 2.53e-11 | 4 |
epithelial cell of lung | 2.26e-09 | 19 |
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
rectum | 2.53e-11 | 4 |
intestinal mucosa | 2.53e-11 | 4 |
wall of intestine | 2.53e-11 | 4 |
gastrointestinal system mucosa | 2.53e-11 | 4 |
gastrointestinal system epithelium | 2.53e-11 | 4 |
intestinal epithelium | 2.53e-11 | 4 |
respiratory tract epithelium | 2.26e-09 | 19 |
lung epithelium | 2.26e-09 | 19 |
lower digestive tract | 2.53e-09 | 5 |
lung | 3.15e-08 | 22 |
respiratory tube | 3.15e-08 | 22 |
respiration organ | 3.15e-08 | 22 |
pair of lungs | 3.15e-08 | 22 |
lung primordium | 3.15e-08 | 22 |
lung bud | 3.15e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.34e-11 | 15 |
lung small cell carcinoma | 2.80e-11 | 4 |
respiratory system cancer | 6.14e-11 | 16 |
sarcoma | 6.69e-09 | 20 |
cell type cancer | 1.55e-07 | 143 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |