FFCP PHASE1:Hg19::chr19:18391246..18391315,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:18391246..18391315,+ to FFCP PHASE1:Hg19::chr19:18391246..18391315,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AB593186_5end | |||
|cluster_id=chr19:18391246..18391315,+ | |||
|coexpression_cluster_id=C909 | |||
|description=CAGE_peak_1_at_AB593186_5end | |||
|id=chr19:18391246..18391315,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.17e-18!140;CL:0002031!1.72e-13!124;CL:0000037!4.07e-13!172;CL:0000566!4.07e-13!172;CL:0000988!4.89e-13!182;CL:0002087!3.64e-12!119;CL:0002032!1.80e-11!165;CL:0000837!1.80e-11!165;CL:0000791!1.11e-10!18;CL:0000789!1.11e-10!18;CL:0002420!1.11e-10!18;CL:0002419!1.11e-10!18;CL:0000790!1.11e-10!18;CL:0000838!1.64e-09!52;CL:0000542!2.73e-09!53;CL:0000051!2.73e-09!53;CL:0000084!3.82e-09!25;CL:0000827!3.82e-09!25;CL:0000625!2.94e-08!11;CL:0000766!7.76e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.34e-11;18!CL:0000789;1.34e-11;18!CL:0002419;1.34e-11;18!CL:0000084;1.04e-09;25!CL:0000625;8.61e-09;11!CL:0000542;9.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-18,136;CL:0002031,1.54e-13,120;CL:0000988,5.03e-13,177;CL:0000037,5.85e-13,168;CL:0002087,3.59e-12,115;CL:0002032,2.94e-11,161;CL:0000837,2.94e-11,161;CL:0000791,3.18e-11,18;CL:0000789,3.18e-11,18;CL:0002420,3.18e-11,18;CL:0002419,3.18e-11,18;CL:0000790,3.18e-11,18;CL:0000838,6.46e-10,52;CL:0000542,1.10e-09,53;CL:0000051,1.10e-09,53;CL:0000084,1.80e-09,25;CL:0000827,1.80e-09,25;CL:0000625,1.17e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.34e-11;18!CL:0000051;9.01e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.22e-23!115;UBERON:0002390!4.68e-08!102;UBERON:0003061!4.68e-08!102;UBERON:0002193!8.70e-08!112;UBERON:0000178!1.62e-07!15;UBERON:0000179!1.62e-07!15;UBERON:0000463!1.62e-07!15;UBERON:0001049!7.28e-07!57;UBERON:0005068!7.28e-07!57;UBERON:0006241!7.28e-07!57;UBERON:0007135!7.28e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.67e-08;15!UBERON:0000179;3.67e-08;15!UBERON:0000463;3.67e-08;15!UBERON:0007023;5.16e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.68e-24,114;UBERON:0002390,3.60e-08,98;UBERON:0003061,3.60e-08,98;UBERON:0000178,7.15e-08,15;UBERON:0000179,7.15e-08,15;UBERON:0000463,7.15e-08,15;UBERON:0002193,1.20e-07,108 | |||
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| ||
|short_description=p1@AB593186 | |||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p1@AB593186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB593186_5end |
Coexpression cluster: | C909_Whole_CD19_CD8_Neutrophils_Eosinophils_CD4_blood |
Association with transcript: | 0bp_to_AB593186_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.24e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 1.54e-13 | 120 |
hematopoietic cell | 5.03e-13 | 177 |
hematopoietic stem cell | 5.85e-13 | 168 |
nongranular leukocyte | 3.59e-12 | 115 |
hematopoietic oligopotent progenitor cell | 2.94e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.94e-11 | 161 |
mature alpha-beta T cell | 3.18e-11 | 18 |
alpha-beta T cell | 3.18e-11 | 18 |
immature T cell | 3.18e-11 | 18 |
mature T cell | 3.18e-11 | 18 |
immature alpha-beta T cell | 3.18e-11 | 18 |
lymphoid lineage restricted progenitor cell | 6.46e-10 | 52 |
lymphocyte | 1.10e-09 | 53 |
common lymphoid progenitor | 1.10e-09 | 53 |
T cell | 1.80e-09 | 25 |
pro-T cell | 1.80e-09 | 25 |
CD8-positive, alpha-beta T cell | 1.17e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.68e-24 | 114 |
hematopoietic system | 3.60e-08 | 98 |
blood island | 3.60e-08 | 98 |
blood | 7.15e-08 | 15 |
haemolymphatic fluid | 7.15e-08 | 15 |
organism substance | 7.15e-08 | 15 |
hemolymphoid system | 1.20e-07 | 108 |