FFCP PHASE1:Hg19::chr19:5217451..5217456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:5217451..5217456,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr19:5217451..5217456,- | |||
|id=chr19:5217451..5217456,- | |||
|ontology_enrichment_celltype=CL:0002575!1.53e-12!2;CL:0000669!5.85e-11!5;CL:0002603!2.04e-08!3;CL:0000708!5.07e-08!3;CL:0000064!8.33e-08!3;CL:0005012!8.33e-08!3;CL:0000067!8.33e-08!3;CL:0002304!8.33e-08!3;CL:0000342!9.25e-07!1;CL:0002565!9.25e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002603;5.96e-34;3!CL:0002327;5.56e-26;4!CL:0000128;1.91e-15;7!CL:0000126;1.91e-15;7!CL:0000127;1.91e-15;7!CL:0000243;3.58e-07;15!CL:0000125;3.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,5.96e-34,3;CL:0002327,5.56e-26,4;CL:0000128,1.91e-15,7;CL:0000126,1.91e-15,7;CL:0000127,1.91e-15,7;CL:0002453,1.91e-15,7;CL:0000243,3.58e-07,15;CL:0000125,3.58e-07,15;CL:0000030,3.58e-07,15;CL:0000339,3.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1!CL:0000339;3.58e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0000488!2.16e-12!4;UBERON:0002203!2.00e-08!6;UBERON:0001768!2.00e-08!6;UBERON:0003210!5.07e-08!3;UBERON:0001778!8.33e-08!3;UBERON:0001775!8.33e-08!3;UBERON:0001736!4.69e-07!1;UBERON:0006298!4.69e-07!1;UBERON:0002506!9.25e-07!1;UBERON:0001769!9.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.56e-26;4!UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0000076,9.39e-14,8;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0000310,2.73e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p@chr19:5217451..5217456,- | |||
}} | }} |
Latest revision as of 16:45, 27 July 2015
Short description: | p@chr19:5217451..5217456, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:5217451..5217456, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 5.96e-34 | 3 |
mammary gland epithelial cell | 5.56e-26 | 4 |
oligodendrocyte | 1.91e-15 | 7 |
macroglial cell | 1.91e-15 | 7 |
astrocyte | 1.91e-15 | 7 |
oligodendrocyte precursor cell | 1.91e-15 | 7 |
glial cell (sensu Vertebrata) | 3.58e-07 | 15 |
glial cell | 3.58e-07 | 15 |
glioblast | 3.58e-07 | 15 |
glioblast (sensu Vertebrata) | 3.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
external ectoderm | 9.39e-14 | 8 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
breast | 2.73e-11 | 10 |
chest | 2.16e-10 | 11 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |