FFCP PHASE1:Hg19::chr1:10754477..10754517,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:10754477..10754517,- to FFCP PHASE1:Hg19::chr1:10754477..10754517,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54897 | |EntrezGene=54897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26002 | |HGNC=26002 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009vmx.2_5end | |||
|cluster_id=chr1:10754477..10754517,- | |||
|description=CAGE_peak_1_at_CASZ1_5end | |||
|id=chr1:10754477..10754517,- | |||
|ontology_enrichment_celltype=CL:0000738!1.91e-19!140;CL:0000037!4.11e-16!172;CL:0000566!4.11e-16!172;CL:0000988!4.97e-16!182;CL:0002031!2.15e-14!124;CL:0002032!2.47e-14!165;CL:0000837!2.47e-14!165;CL:0000838!1.13e-13!52;CL:0000542!1.96e-13!53;CL:0000051!1.96e-13!53;CL:0002087!1.64e-12!119;CL:0000791!1.99e-08!18;CL:0000789!1.99e-08!18;CL:0002420!1.99e-08!18;CL:0002419!1.99e-08!18;CL:0000790!1.99e-08!18;CL:0000084!2.03e-07!25;CL:0000827!2.03e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.56e-10;18!CL:0000789;5.56e-10;18!CL:0002419;5.56e-10;18!CL:0000542;2.47e-08;53!CL:0000084;3.61e-08;25!CL:0000236;1.09e-07;13!CL:0000625;8.17e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.20e-16,136;CL:0000838,6.24e-14,52;CL:0000542,2.41e-13,53;CL:0000051,2.41e-13,53;CL:0000988,2.48e-13,177;CL:0000037,1.02e-12,168;CL:0002031,6.61e-11,120;CL:0002032,8.19e-11,161;CL:0000837,8.19e-11,161;CL:0000791,9.36e-10,18;CL:0000789,9.36e-10,18;CL:0002420,9.36e-10,18;CL:0002419,9.36e-10,18;CL:0000790,9.36e-10,18;CL:0002087,7.15e-09,115;CL:0000084,9.33e-08,25;CL:0000827,9.33e-08,25;CL:0000236,1.28e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;5.56e-10;18!CL:0000051;2.47e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-15!115;UBERON:0000178!8.76e-08!15;UBERON:0000179!8.76e-08!15;UBERON:0000463!8.76e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-09;15!UBERON:0000179;8.41e-09;15!UBERON:0000463;8.41e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.23e-13,114;UBERON:0000178,5.47e-09,15;UBERON:0000179,5.47e-09,15;UBERON:0000463,5.47e-09,15 | |||
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| ||
|short_description=p1@CASZ1 | |||
}} | }} |
Latest revision as of 07:32, 25 September 2015
Short description: | p1@CASZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CASZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc009vmx.2_5end |
EntrezGene: | CASZ1 |
HGNC: | 26002 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.20e-16 | 136 |
lymphoid lineage restricted progenitor cell | 6.24e-14 | 52 |
lymphocyte | 2.41e-13 | 53 |
common lymphoid progenitor | 2.41e-13 | 53 |
hematopoietic cell | 2.48e-13 | 177 |
hematopoietic stem cell | 1.02e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 6.61e-11 | 120 |
hematopoietic oligopotent progenitor cell | 8.19e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.19e-11 | 161 |
mature alpha-beta T cell | 9.36e-10 | 18 |
alpha-beta T cell | 9.36e-10 | 18 |
immature T cell | 9.36e-10 | 18 |
mature T cell | 9.36e-10 | 18 |
immature alpha-beta T cell | 9.36e-10 | 18 |
nongranular leukocyte | 7.15e-09 | 115 |
T cell | 9.33e-08 | 25 |
pro-T cell | 9.33e-08 | 25 |
B cell | 1.28e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.23e-13 | 114 |
blood | 5.47e-09 | 15 |
haemolymphatic fluid | 5.47e-09 | 15 |
organism substance | 5.47e-09 | 15 |