FFCP PHASE1:Hg19::chr1:145413268..145413288,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:145413268..145413288,+ to FFCP PHASE1:Hg19::chr1:145413268..145413288,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148738 | |EntrezGene=148738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4887 | |HGNC=4887 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVN8,F8W6J7 | |UniProt=Q6ZVN8,F8W6J7 | ||
|association_with_transcript=0bp_to_ENST00000336751,ENST00000421822,ENST00000475797,ENST00000497365_5end | |||
|cluster_id=chr1:145413268..145413288,+ | |||
|description=CAGE_peak_1_at_HFE2_5end | |||
|id=chr1:145413268..145413288,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.82e-16!9;CL:0000594!1.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.90e-18;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.01e-18,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.74e-09;4!UBERON:0007284;3.74e-09;4!UBERON:0003104;6.31e-07;31 | |||
|ontology_enrichment_disease=DOID:1036!1.81e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:114;1.40e-08;2!DOID:1036;2.92e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.32e-08,2;DOID:1036,2.92e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-12!115;UBERON:0003104!6.94e-10!238;UBERON:0009142!6.94e-10!238;UBERON:0004151!6.99e-09!3;UBERON:0003978!9.81e-09!3;UBERON:0009751!9.81e-09!3;UBERON:0000946!9.81e-09!3;UBERON:0002523!9.81e-09!3;UBERON:0005983!9.81e-09!3;UBERON:0002165!9.81e-09!3;UBERON:0002062!9.81e-09!3;UBERON:0007280!9.81e-09!3;UBERON:0005057!5.97e-08!26;UBERON:0000490!9.79e-08!138;UBERON:0000078!1.25e-07!18;UBERON:0005256!2.31e-07!143;UBERON:0000481!4.30e-07!347;UBERON:0001630!8.26e-07!2;UBERON:0005090!8.26e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.34e-26;16!UBERON:0002036;3.34e-26;16!UBERON:0004151;2.84e-12;3!UBERON:0002385;3.24e-12;31!UBERON:0001015;3.24e-12;31!UBERON:0000383;3.24e-12;31!UBERON:0003978;4.65e-12;3!UBERON:0000946;4.65e-12;3!UBERON:0005090;3.12e-09;2!UBERON:0001630;3.12e-09;2!UBERON:0000341;4.82e-09;2!UBERON:0002081;1.15e-08;2!UBERON:0007100;1.36e-08;25!UBERON:0002133;1.45e-08;2!UBERON:0003127;2.51e-08;2!UBERON:0002107;5.42e-07;19!UBERON:0006925;5.42e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-13,114;UBERON:0004151,3.00e-12,3;UBERON:0003978,4.92e-12,3;UBERON:0009751,4.92e-12,3;UBERON:0000946,4.92e-12,3;UBERON:0002523,4.92e-12,3;UBERON:0005983,4.92e-12,3;UBERON:0002165,4.92e-12,3;UBERON:0002062,4.92e-12,3;UBERON:0007280,4.92e-12,3;UBERON:0005090,3.12e-09,2;UBERON:0001630,3.12e-09,2;UBERON:0000341,4.82e-09,2;UBERON:0002081,1.22e-08,2;UBERON:0010227,1.22e-08,2;UBERON:0002133,1.54e-08,2;UBERON:0003127,2.60e-08,2;UBERON:0007100,7.38e-08,27;UBERON:0003103,8.27e-08,68;UBERON:0002107,5.27e-07,19;UBERON:0006925,5.27e-07,19;UBERON:0008836,5.27e-07,19;UBERON:0005256,8.21e-07,122 | |||
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| ||
|short_description=p1@HFE2 | |||
}} | }} |
Latest revision as of 17:53, 16 September 2015
Short description: | p1@HFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HFE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336751, ENST00000421822, ENST00000475797, ENST00000497365_5end |
EntrezGene: | HFE2 |
HGNC: | 4887 |
UniProt: | Q6ZVN8F8W6J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.01e-18 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.49e-13 | 114 |
cardiac chamber | 3.00e-12 | 3 |
valve | 4.92e-12 | 3 |
cardiac mesenchyme | 4.92e-12 | 3 |
cardial valve | 4.92e-12 | 3 |
tunica intima | 4.92e-12 | 3 |
heart layer | 4.92e-12 | 3 |
endocardium | 4.92e-12 | 3 |
endocardial cushion | 4.92e-12 | 3 |
presumptive endocardium | 4.92e-12 | 3 |
muscle structure | 3.12e-09 | 2 |
muscle organ | 3.12e-09 | 2 |
throat | 4.82e-09 | 2 |
cardiac atrium | 1.22e-08 | 2 |
future cardiac atrium | 1.22e-08 | 2 |
atrioventricular valve | 1.54e-08 | 2 |
open tracheal system trachea | 2.60e-08 | 2 |
primary circulatory organ | 7.38e-08 | 27 |
compound organ | 8.27e-08 | 68 |
liver | 5.27e-07 | 19 |
digestive gland | 5.27e-07 | 19 |
liver bud | 5.27e-07 | 19 |
trunk mesenchyme | 8.21e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.32e-08 | 2 |
chronic leukemia | 2.92e-07 | 8 |