FFCP PHASE1:Hg19::chr1:177939154..177939204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89866 | |EntrezGene=89866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30301 | |HGNC=30301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-97bp_to_ENST00000486567_5end | |||
|cluster_id=chr1:177939154..177939204,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_SEC16B_5end | |||
|id=chr1:177939154..177939204,- | |||
|ontology_enrichment_celltype=CL:0000181!1.19e-27!12;CL:0000417!1.19e-27!12;CL:0000668!1.19e-27!12;CL:0000414!1.19e-27!12;CL:0000412!1.19e-27!12;CL:0000182!1.19e-27!12;CL:0000223!1.73e-14!59;CL:0002178!7.91e-08!3;CL:0000066!2.64e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.86e-57;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.11e-57,12;CL:0000223,5.94e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.39e-52;13!UBERON:0004161;8.34e-46;11!UBERON:0001041;1.63e-22;30!UBERON:0003104;3.12e-16;31!CL:0000223;2.51e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.98e-13!106;DOID:3493!1.35e-11!2;DOID:7!2.78e-09!39;DOID:0050687!9.06e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:7;1.98e-08;39!DOID:3493;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.67e-09,39;DOID:3493,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.45e-38!25;UBERON:0000015!1.45e-38!25;UBERON:0002423!1.45e-38!25;UBERON:0006235!1.45e-38!25;UBERON:0004161!1.45e-38!25;UBERON:0008835!1.17e-32!22;UBERON:0003894!1.17e-32!22;UBERON:0009854!3.94e-31!23;UBERON:0007499!1.93e-28!25;UBERON:0009856!3.00e-27!26;UBERON:0002107!1.01e-26!19;UBERON:0006925!1.01e-26!19;UBERON:0008836!1.01e-26!19;UBERON:0003929!2.25e-24!54;UBERON:0005057!7.15e-23!26;UBERON:0004921!1.22e-19!129;UBERON:0004185!1.22e-19!129;UBERON:0005911!8.19e-19!82;UBERON:0001007!1.62e-18!155;UBERON:0001555!1.62e-18!155;UBERON:0007026!1.62e-18!155;UBERON:0005172!2.68e-18!55;UBERON:0005173!2.68e-18!55;UBERON:0004119!1.65e-16!169;UBERON:0000925!1.65e-16!169;UBERON:0006595!1.65e-16!169;UBERON:0002368!1.89e-16!35;UBERON:0002417!3.56e-16!61;UBERON:0000916!3.56e-16!61;UBERON:0002365!1.23e-15!31;UBERON:0002330!1.23e-15!31;UBERON:0000077!1.67e-14!130;UBERON:0001041!2.18e-13!98;UBERON:0000949!2.63e-12!45;UBERON:0002294!1.01e-11!7;UBERON:0001173!1.01e-11!7;UBERON:0004912!1.01e-11!7;UBERON:0002530!1.41e-10!59;UBERON:0000945!1.77e-10!8;UBERON:0010039!1.77e-10!8;UBERON:0005177!2.04e-10!107;UBERON:0005409!4.18e-10!35;UBERON:0009569!1.14e-09!113;UBERON:0000466!2.69e-08!126;UBERON:0002110!1.37e-07!3;UBERON:0006242!1.37e-07!3;UBERON:0003104!2.41e-07!238;UBERON:0009142!2.41e-07!238;UBERON:0000490!2.72e-07!138;UBERON:0003914!7.74e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-59;19!UBERON:0006925;1.53e-59;19!UBERON:0002423;1.62e-55;25!UBERON:0002365;3.83e-35;31!UBERON:0002330;3.83e-35;31!UBERON:0002368;8.28e-31;33!UBERON:0000949;4.66e-22;43!UBERON:0005172;1.78e-13;52!UBERON:0005173;1.78e-13;52!UBERON:0002417;1.71e-12;58!UBERON:0000916;1.71e-12;58!UBERON:0002530;5.48e-11;57!UBERON:0001007;5.08e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,3.85e-63,22;UBERON:0003894,3.85e-63,22;UBERON:0009854,2.30e-60,23;UBERON:0002107,1.63e-59,19;UBERON:0006925,1.63e-59,19;UBERON:0008836,1.63e-59,19;UBERON:0007499,1.77e-55,25;UBERON:0009497,1.77e-55,25;UBERON:0000015,1.77e-55,25;UBERON:0002423,1.77e-55,25;UBERON:0006235,1.77e-55,25;UBERON:0004161,1.77e-55,25;UBERON:0009856,2.57e-53,26;UBERON:0002365,3.10e-36,31;UBERON:0002330,3.10e-36,31;UBERON:0002368,5.14e-32,35;UBERON:0003929,1.52e-30,54;UBERON:0000949,9.69e-25,45;UBERON:0005172,1.73e-20,54;UBERON:0005173,1.73e-20,54;UBERON:0005911,9.18e-20,82;UBERON:0002530,1.10e-18,59;UBERON:0002417,2.33e-18,60;UBERON:0000916,2.33e-18,60;UBERON:0001041,2.63e-15,87;UBERON:0004921,2.86e-13,118;UBERON:0003914,4.09e-11,117;UBERON:0005256,1.29e-10,122;UBERON:0001007,1.35e-10,145;UBERON:0001555,1.35e-10,145;UBERON:0007026,1.35e-10,145;UBERON:0005177,1.49e-10,101;UBERON:0000490,1.96e-10,148;UBERON:0004119,1.71e-09,160;UBERON:0000925,1.71e-09,160;UBERON:0006595,1.71e-09,160;UBERON:0009569,2.00e-09,112;UBERON:0001048,7.90e-08,160;UBERON:0003104,7.90e-08,160;UBERON:0009142,7.90e-08,160 | |||
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|short_description=p4@SEC16B | |||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p4@SEC16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC16B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -97bp_to_ENST00000486567_5end |
EntrezGene: | SEC16B |
HGNC: | 30301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.11e-57 | 12 |
endodermal cell | 5.94e-15 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.67e-09 | 39 |
signet ring cell adenocarcinoma | 2.00e-08 | 2 |