FFCP PHASE1:Hg19::chr1:57285332..57285349,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:57285332..57285349,- to FFCP PHASE1:Hg19::chr1:57285332..57285349,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199920 | |EntrezGene=199920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27295 | |HGNC=27295 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VWT5 | |UniProt=Q5VWT5 | ||
|association_with_transcript=19bp_to_ENST00000484327,NM_001004303,uc001cym.3,uc009vzu.1,uc009vzv.1_5end | |||
|cluster_id=chr1:57285332..57285349,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_C1orf168_5end | |||
|id=chr1:57285332..57285349,- | |||
|ontology_enrichment_celltype=CL:0000064!1.08e-09!3;CL:0005012!1.08e-09!3;CL:0000067!1.08e-09!3;CL:0002304!1.08e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.55e-12,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!5.18e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-31!115;UBERON:0003075!3.46e-25!86;UBERON:0007284!3.46e-25!86;UBERON:0002346!1.02e-23!90;UBERON:0003056!1.91e-23!61;UBERON:0001049!5.57e-21!57;UBERON:0005068!5.57e-21!57;UBERON:0006241!5.57e-21!57;UBERON:0007135!5.57e-21!57;UBERON:0002780!2.38e-20!41;UBERON:0001890!2.38e-20!41;UBERON:0006240!2.38e-20!41;UBERON:0003080!9.20e-20!42;UBERON:0000153!8.64e-19!129;UBERON:0007811!8.64e-19!129;UBERON:0002616!4.21e-18!59;UBERON:0000955!1.22e-17!69;UBERON:0006238!1.22e-17!69;UBERON:0005743!1.27e-17!86;UBERON:0000033!1.81e-17!123;UBERON:0001893!2.66e-17!34;UBERON:0001869!4.40e-16!32;UBERON:0000956!5.60e-16!25;UBERON:0000203!5.60e-16!25;UBERON:0002791!1.20e-15!33;UBERON:0002619!1.42e-15!22;UBERON:0001017!1.95e-15!82;UBERON:0000073!2.41e-15!94;UBERON:0001016!2.41e-15!94;UBERON:0001950!3.02e-14!20;UBERON:0002020!6.24e-13!34;UBERON:0003528!6.24e-13!34;UBERON:0004121!1.72e-11!169;UBERON:0000924!4.82e-11!173;UBERON:0006601!4.82e-11!173;UBERON:0000025!4.40e-10!194;UBERON:0001778!1.08e-09!3;UBERON:0001775!1.08e-09!3;UBERON:0000477!1.73e-09!286;UBERON:0000483!1.82e-09!309;UBERON:0000119!2.83e-09!312;UBERON:0000475!3.02e-09!365;UBERON:0002368!2.10e-08!35;UBERON:0000200!6.31e-08!6;UBERON:0004111!8.09e-08!241;UBERON:0000481!8.40e-08!347;UBERON:0000062!8.53e-08!511;UBERON:0003296!1.32e-07!4;UBERON:0010133!1.32e-07!4;UBERON:0001905!2.12e-07!2;UBERON:0002757!2.12e-07!2;UBERON:0010134!2.12e-07!2;UBERON:0002784!2.12e-07!2;UBERON:0005408!2.12e-07!2;UBERON:0001899!2.12e-07!2;UBERON:0000488!2.31e-07!4;UBERON:0001870!5.03e-07!2;UBERON:0007625!7.89e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;5.52e-17;1!UBERON:0005623;5.52e-17;1!UBERON:0002107;2.45e-13;19!UBERON:0006925;2.45e-13;19!UBERON:0000966;3.23e-13;5!UBERON:0005388;3.23e-13;5!UBERON:0001802;3.23e-13;5!UBERON:0002368;2.27e-10;33!UBERON:0002423;3.31e-10;25!UBERON:0001905;6.67e-09;2!UBERON:0001954;6.67e-09;2!UBERON:0002757;6.67e-09;2!UBERON:0010134;6.67e-09;2!UBERON:0003022;6.67e-09;2!UBERON:0005408;6.67e-09;2!UBERON:0002421;6.67e-09;2!UBERON:0001899;6.67e-09;2!UBERON:0002600;6.67e-09;2!UBERON:0002365;1.51e-08;31!UBERON:0002330;1.51e-08;31!UBERON:0000949;2.34e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,5.53e-17,1;UBERON:0005623,5.53e-17,1;UBERON:0002107,2.30e-13,19;UBERON:0006925,2.30e-13,19;UBERON:0008836,2.30e-13,19;UBERON:0008835,1.39e-11,22;UBERON:0003894,1.39e-11,22;UBERON:0000966,3.06e-11,6;UBERON:0005388,3.06e-11,6;UBERON:0001802,3.06e-11,6;UBERON:0009854,4.30e-11,23;UBERON:0002368,4.95e-11,35;UBERON:0007499,3.16e-10,25;UBERON:0009497,3.16e-10,25;UBERON:0000015,3.16e-10,25;UBERON:0002423,3.16e-10,25;UBERON:0006235,3.16e-10,25;UBERON:0004161,3.16e-10,25;UBERON:0009856,7.63e-10,26;UBERON:0001954,6.94e-09,2;UBERON:0003022,6.94e-09,2;UBERON:0002421,6.94e-09,2;UBERON:0002600,6.94e-09,2;UBERON:0001905,7.49e-09,2;UBERON:0002757,7.49e-09,2;UBERON:0010134,7.49e-09,2;UBERON:0005408,7.49e-09,2;UBERON:0001899,7.49e-09,2;UBERON:0000949,1.41e-08,45;UBERON:0002365,2.70e-08,31;UBERON:0002330,2.70e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35404805622199,0.717873024576814,0.199679000498991,0.429226048136571,1.56220020209311,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,1.22583065500418,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0,0.573409195690071,0.665574309221114,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,0,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,2.85906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0.603851374266694,0,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,1.26698501011437,0,0,0,0,0.530450887527676,0.535928260312357,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,3.9313088667105,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95227036798582,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35404805622199,0.717873024576814,0.199679000498991,0.429226048136571,1.56220020209311,0,0,0,0.157566364614447,0,0.13480708770837,0,0,0,1.22583065500418,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0,0,0.573409195690071,0.665574309221114,0,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,0,0,0,1.07140367175657,0.336283722218824,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,2.85906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0.603851374266694,0,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,1.26698501011437,0,0,0,0,0.530450887527676,0.535928260312357,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p3@C1orf168 | |||
}} | }} |
Latest revision as of 16:21, 18 September 2015
Short description: | p3@C1orf168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1orf168_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 19bp_to_ENST00000484327, NM_001004303, uc001cym.3, uc009vzu.1, uc009vzv.1_5end |
EntrezGene: | C1orf168 |
HGNC: | 27295 |
UniProt: | Q5VWT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.55e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 5.53e-17 | 1 |
semi-lunar valve | 5.53e-17 | 1 |
liver | 2.30e-13 | 19 |
digestive gland | 2.30e-13 | 19 |
liver bud | 2.30e-13 | 19 |
hepatic diverticulum | 1.39e-11 | 22 |
liver primordium | 1.39e-11 | 22 |
retina | 3.06e-11 | 6 |
photoreceptor array | 3.06e-11 | 6 |
posterior segment of eyeball | 3.06e-11 | 6 |
digestive tract diverticulum | 4.30e-11 | 23 |
endocrine gland | 4.95e-11 | 35 |
epithelial sac | 3.16e-10 | 25 |
epithelium of foregut-midgut junction | 3.16e-10 | 25 |
anatomical boundary | 3.16e-10 | 25 |
hepatobiliary system | 3.16e-10 | 25 |
foregut-midgut junction | 3.16e-10 | 25 |
septum transversum | 3.16e-10 | 25 |
sac | 7.63e-10 | 26 |
Ammon's horn | 6.94e-09 | 2 |
lobe parts of cerebral cortex | 6.94e-09 | 2 |
hippocampal formation | 6.94e-09 | 2 |
limbic lobe | 6.94e-09 | 2 |
pineal body | 7.49e-09 | 2 |
regional part of epithalamus | 7.49e-09 | 2 |
secretory circumventricular organ | 7.49e-09 | 2 |
circumventricular organ | 7.49e-09 | 2 |
epithalamus | 7.49e-09 | 2 |
endocrine system | 1.41e-08 | 45 |
exocrine gland | 2.70e-08 | 31 |
exocrine system | 2.70e-08 | 31 |