FFCP PHASE1:Hg19::chr1:957600..957612,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:957600..957612,+ to FFCP PHASE1:Hg19::chr1:957600..957612,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:957600..957612,+ | |||
|description=CAGE_peak_at_chr1:957600..957612,+ | |||
|id=chr1:957600..957612,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.27e-25!254;CL:0002321!6.44e-11!248;CL:0000220!7.99e-11!246;CL:0000223!2.49e-10!59;CL:0002076!7.28e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002202;4.09e-10;9!CL:0002632;4.09e-10;9!CL:0002328;2.45e-08;3!CL:0002379;3.71e-07;1!CL:0002368;5.07e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.91e-10,9;CL:0002632,4.91e-10,9;CL:0002328,3.29e-08,3;CL:0000223,9.84e-08,58;CL:0000066,1.79e-07,253;CL:0002379,3.32e-07,1;CL:0002368,5.73e-07,13;CL:0000319,6.24e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.58e-10!106;DOID:120!8.80e-07!27;DOID:0050687!9.62e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3620;3.71e-07;1!DOID:3565;3.71e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.32e-07,1;DOID:3565,3.32e-07,1;DOID:3112,5.89e-07,1;DOID:3030,6.24e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.23e-08!169;UBERON:0000925!3.23e-08!169;UBERON:0006595!3.23e-08!169;UBERON:0006554!2.12e-07!44;UBERON:0001008!4.99e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.45e-08;3!UBERON:0002031;2.45e-08;3!UBERON:0000485;1.37e-07;7!UBERON:0005911;9.61e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,9.92e-10,9;UBERON:0004815,3.29e-08,3;UBERON:0002031,3.29e-08,3;UBERON:0000941,8.27e-07,1;UBERON:0001785,8.27e-07,1;UBERON:0002464,8.27e-07,1;UBERON:0004904,8.27e-07,1;UBERON:0001021,8.27e-07,1;UBERON:0003902,8.27e-07,1;UBERON:0005425,8.27e-07,1 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,3.48900583986214,0,0.527533956456907,0,0,1.34465029290355,0,0,0,0,1.22400414746552,0.313454721478088,0,0.410623275218653,0.502170558379211,0.305653622991805,0,0.157421562627358,0,0,0,2.75826367343678,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.443458794925128,0.351339142772504,0.130979075497713,0,0.741568885568859,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0.835979866147242,0,0,0,0.805658634218294,0,1.70843440283719,0.367663080345869,1.62028389576352,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,1.97334038733728,0,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0.365921118388786,0,0.116193942869518,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,2.95262181849859,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0.439001141634502,0,0.301586917234893,0.462942225792648,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0.839910640994298,0.283550194484773,0,0.290633938513962,1.15014803749563,0,0,0,0,0,0.063497894292169,0.381988425558278,0,3.4214489204541,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,1.19967589418468,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,1.03850885836724,0.116210378459959,0.362578348774867,3.60911646545913,0.736647911487171,0.34444334449382,0.910455840033585,0.393373244878272,0.451199612907412,0.462092022626489,0,1.46139224653261,0.527758144464379,0,0.510281115829547,0.431831832204279,1.54227252690289,0.270946437543853,0.501689773854853,0,0,1.34324852833307,0,0,0,0,0,0,0.183138929636687,0,0.574265537996172,0,0,0,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0,0,0.495854746082934,0.960950336825531,0.638063562472921,0.6069466851333,0,0.62962469366128,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0.823611089208164,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0.848432591722276,1.13008116620243,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,5.44454924306613,0,0.86101074534246,0,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0.281338832821026,0.222617410045812,0.16480387422676,0.211125408127993,0,0,0,0.20453736500431,0,0.933118762985422,0.359473404589307,0,0,0.197286811273867,0,0,0,0,0,0.7812832832557,0,0,0.341380344856499,1.27126825146383,0.709163045303809,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0.455768223388005,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0.632994193584081,0.489698424477443,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0.126621591911757,0,0.561111741760736,0.213452994739353,5.59466906829965,0,0.114536596165916,0,0,0,0.707082103850386,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,1.16495949527454,0.236349546921671,0.0824158583811665,0.337017719270924,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.275078873194468,0.83088067605837,0,0,0,0.335434687599266,0.0788057072991982,0.367182116944987,0.105600336519406,0.537862017998534,0,0,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.10678741256769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| ||
|short_description=p@chr1:957600..957612,+ | |||
}} | }} |
Latest revision as of 11:36, 28 July 2015
Short description: | p@chr1:957600..957612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:957600..957612, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.91e-10 | 9 |
epithelial cell of lower respiratory tract | 4.91e-10 | 9 |
bronchial epithelial cell | 3.29e-08 | 3 |
endodermal cell | 9.84e-08 | 58 |
epithelial cell | 1.79e-07 | 253 |
meningothelial cell | 3.32e-07 | 1 |
respiratory epithelial cell | 5.73e-07 | 13 |
mucus secreting cell | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 9.92e-10 | 9 |
lower respiratory tract epithelium | 3.29e-08 | 3 |
epithelium of bronchus | 3.29e-08 | 3 |
cranial nerve II | 8.27e-07 | 1 |
cranial nerve | 8.27e-07 | 1 |
nerve trunk | 8.27e-07 | 1 |
nerve connecting eye with brain | 8.27e-07 | 1 |
nerve | 8.27e-07 | 1 |
retinal neural layer | 8.27e-07 | 1 |
presumptive neural retina | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.32e-07 | 1 |
meningioma | 3.32e-07 | 1 |
papillary adenocarcinoma | 5.89e-07 | 1 |
mucinous adenocarcinoma | 6.24e-07 | 1 |