FFCP PHASE1:Hg19::chr21:35014977..35014986,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:35014977..35014986,+ to FFCP PHASE1:Hg19::chr21:35014977..35014986,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6453 | |EntrezGene=6453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6183 | |HGNC=6183 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXS9 | |UniProt=C9JXS9 | ||
|association_with_transcript=129bp_to_ENST00000451686_5end | |||
|cluster_id=chr21:35014977..35014986,+ | |||
|description=CAGE_peak_16_at_ITSN1_5end | |||
|id=chr21:35014977..35014986,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002592;5.04e-34;3!CL:0002494;1.49e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,4.27e-34,3;CL:0002494,1.45e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.15e-20!32;UBERON:0002020!3.38e-20!34;UBERON:0003528!3.38e-20!34;UBERON:0001893!4.63e-20!34;UBERON:0002791!5.70e-19!33;UBERON:0002780!1.18e-16!41;UBERON:0001890!1.18e-16!41;UBERON:0006240!1.18e-16!41;UBERON:0003080!4.98e-16!42;UBERON:0001049!7.48e-16!57;UBERON:0005068!7.48e-16!57;UBERON:0006241!7.48e-16!57;UBERON:0007135!7.48e-16!57;UBERON:0000955!4.17e-15!69;UBERON:0006238!4.17e-15!69;UBERON:0002616!6.28e-15!59;UBERON:0000956!3.93e-14!25;UBERON:0000203!3.93e-14!25;UBERON:0002619!6.92e-14!22;UBERON:0001950!7.55e-14!20;UBERON:0001017!7.79e-11!82;UBERON:0003056!1.52e-10!61;UBERON:0005743!1.57e-10!86;UBERON:0000073!1.65e-10!94;UBERON:0001016!1.65e-10!94;UBERON:0003075!1.82e-09!86;UBERON:0007284!1.82e-09!86;UBERON:0004111!6.35e-09!241;UBERON:0002346!1.45e-08!90;UBERON:0000033!5.01e-08!123;UBERON:0000025!7.72e-08!194;UBERON:0002308!1.23e-07!9;UBERON:0000125!1.23e-07!9;UBERON:0000153!1.31e-07!129;UBERON:0007811!1.31e-07!129;UBERON:0007023!1.40e-07!115;UBERON:0000200!2.01e-07!6;UBERON:0004121!3.27e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;5.04e-34;3!UBERON:0003498;5.04e-34;3!UBERON:0005985;5.04e-34;3!UBERON:0001621;5.04e-34;3!UBERON:0002298;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,4.27e-34,3;UBERON:0000988,5.96e-34,3;UBERON:0003498,4.21e-21,5;UBERON:0005985,4.21e-21,5;UBERON:0002298,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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| ||
|short_description=p16@ITSN1 | |||
}} | }} |
Latest revision as of 04:59, 18 September 2015
Short description: | p16@ITSN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ITSN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 129bp_to_ENST00000451686_5end |
EntrezGene: | ITSN1 |
HGNC: | 6183 |
UniProt: | C9JXS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 4.27e-34 | 3 |
cardiocyte | 1.45e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 4.27e-34 | 3 |
pons | 5.96e-34 | 3 |
heart blood vessel | 4.21e-21 | 5 |
coronary vessel | 4.21e-21 | 5 |
brainstem | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |