FFCP PHASE1:Hg19::chr21:42219223..42219235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1826 | |EntrezGene=1826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3039 | |HGNC=3039 | ||
|TSSclassifier=strong | |||
|UniProt=O60469 | |UniProt=O60469 | ||
|association_with_transcript=-158bp_to_ENST00000400454_5end | |||
|cluster_id=chr21:42219223..42219235,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_9_at_DSCAM_5end | |||
|id=chr21:42219223..42219235,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-73!57;UBERON:0005068!2.66e-73!57;UBERON:0006241!2.66e-73!57;UBERON:0007135!2.66e-73!57;UBERON:0002780!2.25e-64!41;UBERON:0001890!2.25e-64!41;UBERON:0006240!2.25e-64!41;UBERON:0001017!6.75e-63!82;UBERON:0003080!1.10e-62!42;UBERON:0005743!1.80e-62!86;UBERON:0002616!3.26e-59!59;UBERON:0000073!1.36e-58!94;UBERON:0001016!1.36e-58!94;UBERON:0000955!1.76e-58!69;UBERON:0006238!1.76e-58!69;UBERON:0002020!7.45e-58!34;UBERON:0003528!7.45e-58!34;UBERON:0001893!1.10e-57!34;UBERON:0002791!6.74e-55!33;UBERON:0002346!4.26e-54!90;UBERON:0003075!7.09e-54!86;UBERON:0007284!7.09e-54!86;UBERON:0001869!2.30e-52!32;UBERON:0003056!6.08e-47!61;UBERON:0002619!9.17e-43!22;UBERON:0007023!5.13e-38!115;UBERON:0000956!2.86e-37!25;UBERON:0000203!2.86e-37!25;UBERON:0001950!1.20e-36!20;UBERON:0000033!1.77e-36!123;UBERON:0000153!2.53e-34!129;UBERON:0007811!2.53e-34!129;UBERON:0000924!3.55e-32!173;UBERON:0006601!3.55e-32!173;UBERON:0004121!2.23e-31!169;UBERON:0002308!1.80e-22!9;UBERON:0000125!1.80e-22!9;UBERON:0000200!1.85e-19!6;UBERON:0002420!4.20e-17!9;UBERON:0007245!4.20e-17!9;UBERON:0010009!4.20e-17!9;UBERON:0010011!4.20e-17!9;UBERON:0000454!4.20e-17!9;UBERON:0009663!9.21e-17!7;UBERON:0000025!4.75e-16!194;UBERON:0000369!2.61e-14!4;UBERON:0002435!2.61e-14!4;UBERON:0000204!2.61e-14!4;UBERON:0010082!2.61e-14!4;UBERON:0001871!1.02e-13!7;UBERON:0004111!1.16e-13!241;UBERON:0003076!2.94e-12!15;UBERON:0003057!2.94e-12!15;UBERON:0000477!1.70e-11!286;UBERON:0000349!3.30e-11!5;UBERON:0002021!3.77e-11!5;UBERON:0005383!3.93e-11!3;UBERON:0005382!3.93e-11!3;UBERON:0000475!9.72e-11!365;UBERON:0000483!1.22e-10!309;UBERON:0000119!1.94e-10!312;UBERON:0002771!2.41e-10!3;UBERON:0006331!2.74e-10!3;UBERON:0002240!4.02e-10!3;UBERON:0000988!5.19e-10!3;UBERON:0002298!9.82e-10!8;UBERON:0000064!2.03e-09!219;UBERON:0001894!2.74e-08!7;UBERON:0006222!2.74e-08!7;UBERON:0001954!3.31e-08!2;UBERON:0003022!3.31e-08!2;UBERON:0002421!3.31e-08!2;UBERON:0002600!3.31e-08!2;UBERON:0001897!3.67e-08!2;UBERON:0000007!4.67e-08!2;UBERON:0001870!5.35e-08!2;UBERON:0001873!5.93e-08!2;UBERON:0010122!5.93e-08!2;UBERON:0000062!1.26e-07!511;UBERON:0002148!1.72e-07!2;UBERON:0009662!1.72e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;8.10e-26;2!UBERON:0010225;8.10e-26;2!UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0002346;1.00e-13;4!UBERON:0000923;1.00e-13;4!UBERON:0010316;1.00e-13;4!UBERON:0005291;1.00e-13;4!UBERON:0002784;1.21e-13;4!UBERON:0002050;2.94e-11;5!UBERON:0005423;2.94e-11;5!UBERON:0001894;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,9.18e-26,2;UBERON:0010225,9.18e-26,2;UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0002784,1.29e-13,4;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
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| ||
|short_description=p9@DSCAM | |||
}} | }} |
Latest revision as of 12:10, 18 September 2015
Short description: | p9@DSCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DSCAM_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -158bp_to_ENST00000400454_5end |
EntrezGene: | DSCAM |
HGNC: | 3039 |
UniProt: | O60469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 9.18e-26 | 2 |
thalamic complex | 9.18e-26 | 2 |
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
regional part of diencephalon | 1.29e-13 | 4 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |