FFCP PHASE1:Hg19::chr22:38005033..38005064,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:38005033..38005064,+ to FFCP PHASE1:Hg19::chr22:38005033..38005064,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26088 | |EntrezGene=26088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17842 | |HGNC=17842 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYR7,B0QYR9,Q9UJY5 | |UniProt=B0QYR7,B0QYR9,Q9UJY5 | ||
|association_with_transcript=0bp_to_ENST00000406772,ENST00000447515,NM_001172688,uc003atf.2_5end | |||
|cluster_id=chr22:38005033..38005064,+ | |||
|description=CAGE_peak_2_at_GGA1_5end | |||
|id=chr22:38005033..38005064,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.94e-08;39!CL:0000234;9.94e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.56e-07,72;CL:0000473,7.58e-07,48;CL:0000234,7.58e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.63e-07!57;UBERON:0005068!2.63e-07!57;UBERON:0006241!2.63e-07!57;UBERON:0007135!2.63e-07!57;UBERON:0000073!3.13e-07!94;UBERON:0001016!3.13e-07!94;UBERON:0002346!3.19e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.51e-08,86;UBERON:0001049,4.13e-07,56;UBERON:0005068,4.13e-07,56;UBERON:0006241,4.13e-07,56;UBERON:0007135,4.13e-07,56;UBERON:0001016,5.05e-07,89;UBERON:0003075,8.91e-07,82;UBERON:0007284,8.91e-07,82 | |||
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| ||
|short_description=p2@GGA1 | |||
}} | }} |
Latest revision as of 05:38, 20 September 2015
Short description: | p2@GGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000406772, ENST00000447515, NM_001172688, uc003atf.2_5end |
EntrezGene: | GGA1 |
HGNC: | 17842 |
UniProt: | B0QYR7B0QYR9Q9UJY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.56e-07 | 72 |
defensive cell | 7.58e-07 | 48 |
phagocyte | 7.58e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.51e-08 | 86 |
neural tube | 4.13e-07 | 56 |
neural rod | 4.13e-07 | 56 |
future spinal cord | 4.13e-07 | 56 |
neural keel | 4.13e-07 | 56 |
nervous system | 5.05e-07 | 89 |
neural plate | 8.91e-07 | 82 |
presumptive neural plate | 8.91e-07 | 82 |