FFCP PHASE1:Hg19::chr2:157198760..157198762,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:157198760..157198762,- to FFCP PHASE1:Hg19::chr2:157198760..157198762,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4929 | |EntrezGene=4929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |HGNC=7981 | ||
|TSSclassifier=strong | |||
|UniProt=P43354 | |UniProt=P43354 | ||
|association_with_transcript=97bp_to_ENST00000409572_5end | |||
|cluster_id=chr2:157198760..157198762,- | |||
|description=CAGE_peak_5_at_NR4A2_5end | |||
|id=chr2:157198760..157198762,- | |||
|ontology_enrichment_celltype=CL:0002057!3.26e-19!42;CL:0000860!7.27e-19!45;CL:0000738!1.32e-17!140;CL:0002087!3.28e-17!119;CL:0002031!4.98e-17!124;CL:0000766!5.79e-14!76;CL:0000557!1.97e-12!71;CL:0000839!3.20e-12!70;CL:0000037!5.09e-12!172;CL:0000566!5.09e-12!172;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0002009!2.20e-11!65;CL:0002194!2.57e-11!63;CL:0000576!2.57e-11!63;CL:0000040!2.57e-11!63;CL:0000559!2.57e-11!63;CL:0000988!2.59e-10!182;CL:0000763!7.67e-07!112;CL:0000049!7.67e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-28;33!CL:0002057;1.73e-28;33!CL:0000473;3.15e-21;39!CL:0000234;3.15e-21;39!CL:0000576;2.25e-17;48!CL:0000766;2.09e-15;69!CL:0002087;2.49e-09;104!CL:0000763;2.12e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.41e-32,42;CL:0002057,8.41e-32,42;CL:0000473,1.46e-28,48;CL:0000234,1.46e-28,48;CL:0000766,1.26e-27,72;CL:0000738,2.02e-26,136;CL:0000839,3.99e-23,66;CL:0002087,1.08e-22,115;CL:0000557,1.31e-22,67;CL:0002031,3.01e-22,120;CL:0002194,1.12e-20,59;CL:0000576,1.12e-20,59;CL:0000040,1.12e-20,59;CL:0000559,1.12e-20,59;CL:0002009,1.14e-19,61;CL:0000037,5.94e-19,168;CL:0002032,1.02e-17,161;CL:0000837,1.02e-17,161;CL:0000988,4.25e-17,177;CL:0000763,3.11e-15,108;CL:0000049,3.11e-15,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-11!80;UBERON:0001474!1.74e-10!86;UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0004765!4.45e-09!101;UBERON:0001434!4.45e-09!101;UBERON:0002193!2.25e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.48e-21,76;UBERON:0002390,4.22e-20,98;UBERON:0003061,4.22e-20,98;UBERON:0001474,1.36e-18,82;UBERON:0002193,4.98e-18,108;UBERON:0004765,7.12e-17,90;UBERON:0002405,4.67e-16,93;UBERON:0001434,7.11e-15,100;UBERON:0003081,2.46e-09,203;UBERON:0002204,3.40e-08,167;UBERON:0002384,6.64e-07,371 | |||
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| ||
|short_description=p5@NR4A2 | |||
}} | }} |
Latest revision as of 16:11, 17 September 2015
Short description: | p5@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NR4A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 97bp_to_ENST00000409572_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | P43354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.41e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-32 | 42 |
defensive cell | 1.46e-28 | 48 |
phagocyte | 1.46e-28 | 48 |
myeloid leukocyte | 1.26e-27 | 72 |
leukocyte | 2.02e-26 | 136 |
myeloid lineage restricted progenitor cell | 3.99e-23 | 66 |
nongranular leukocyte | 1.08e-22 | 115 |
granulocyte monocyte progenitor cell | 1.31e-22 | 67 |
hematopoietic lineage restricted progenitor cell | 3.01e-22 | 120 |
monopoietic cell | 1.12e-20 | 59 |
monocyte | 1.12e-20 | 59 |
monoblast | 1.12e-20 | 59 |
promonocyte | 1.12e-20 | 59 |
macrophage dendritic cell progenitor | 1.14e-19 | 61 |
hematopoietic stem cell | 5.94e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-17 | 161 |
hematopoietic cell | 4.25e-17 | 177 |
myeloid cell | 3.11e-15 | 108 |
common myeloid progenitor | 3.11e-15 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.48e-21 | 76 |
hematopoietic system | 4.22e-20 | 98 |
blood island | 4.22e-20 | 98 |
bone element | 1.36e-18 | 82 |
hemolymphoid system | 4.98e-18 | 108 |
skeletal element | 7.12e-17 | 90 |
immune system | 4.67e-16 | 93 |
skeletal system | 7.11e-15 | 100 |
lateral plate mesoderm | 2.46e-09 | 203 |
musculoskeletal system | 3.40e-08 | 167 |
connective tissue | 6.64e-07 | 371 |