FFCP PHASE1:Hg19::chr2:47300229..47300236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:47300229..47300236,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr2:47300229..47300236,+ | |||
|id=chr2:47300229..47300236,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-75!42;CL:0000860!4.82e-70!45;CL:0000766!1.50e-56!76;CL:0002009!2.68e-55!65;CL:0002194!9.81e-54!63;CL:0000576!9.81e-54!63;CL:0000040!9.81e-54!63;CL:0000559!9.81e-54!63;CL:0000557!3.28e-53!71;CL:0000839!8.58e-51!70;CL:0000738!9.05e-41!140;CL:0000763!2.35e-40!112;CL:0000049!2.35e-40!112;CL:0002087!3.97e-37!119;CL:0002031!3.43e-35!124;CL:0000037!4.54e-35!172;CL:0000566!4.54e-35!172;CL:0002393!4.30e-34!9;CL:0002397!4.30e-34!9;CL:0000988!1.32e-32!182;CL:0002032!2.14e-31!165;CL:0000837!2.14e-31!165;CL:0000134!2.15e-13!358;CL:0000767!2.46e-13!3;CL:0002320!6.10e-13!365;CL:0000875!3.50e-12!3;CL:0002396!3.50e-12!3;CL:0000219!2.42e-11!390;CL:0000048!3.82e-10!430;CL:0000723!7.32e-10!436;CL:0000034!1.70e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000767;2.95e-47;3!CL:0002393;2.21e-23;6!CL:0002397;2.21e-23;6!CL:0000094;3.31e-18;8!CL:0000081;2.02e-13;11!CL:0000766;2.99e-13;69!CL:0000576;3.55e-13;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.96e-47,3;CL:0002393,1.85e-27,9;CL:0002397,1.85e-27,9;CL:0000766,4.24e-20,72;CL:0000094,3.31e-18,8;CL:0000860,2.46e-17,42;CL:0002057,2.46e-17,42;CL:0000473,4.05e-15,48;CL:0000234,4.05e-15,48;CL:0000081,2.02e-13,11;CL:0000763,3.62e-13,108;CL:0000049,3.62e-13,108;CL:0000738,1.57e-12,136;CL:0002194,5.19e-12,59;CL:0000576,5.19e-12,59;CL:0000040,5.19e-12,59;CL:0000559,5.19e-12,59;CL:0002009,1.31e-11,61;CL:0000839,1.04e-10,66;CL:0000557,1.52e-10,67;CL:0002032,1.98e-10,161;CL:0000837,1.98e-10,161;CL:0000037,5.96e-10,168;CL:0000988,2.16e-09,177;CL:0002087,9.35e-08,115;CL:0002031,2.10e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.91e-53!102;UBERON:0003061!6.91e-53!102;UBERON:0002371!2.30e-49!80;UBERON:0002193!2.29e-47!112;UBERON:0001474!2.28e-45!86;UBERON:0004765!1.95e-37!101;UBERON:0001434!1.95e-37!101;UBERON:0002405!6.37e-34!115;UBERON:0003081!1.02e-22!216;UBERON:0002204!2.15e-19!167;UBERON:0002384!2.54e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.22e-11,98;UBERON:0003061,1.22e-11,98;UBERON:0002193,1.70e-10,108;UBERON:0002371,2.96e-09,76;UBERON:0001474,1.50e-08,82;UBERON:0004765,9.39e-08,90;UBERON:0002405,1.72e-07,93;UBERON:0001434,6.20e-07,100 | |||
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| ||
|short_description=p@chr2:47300229..47300236,+ | |||
}} | }} |
Latest revision as of 10:34, 29 July 2015
Short description: | p@chr2:47300229..47300236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47300229..47300236, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.96e-47 | 3 |
intermediate monocyte | 1.85e-27 | 9 |
CD14-positive, CD16-positive monocyte | 1.85e-27 | 9 |
myeloid leukocyte | 4.24e-20 | 72 |
granulocyte | 3.31e-18 | 8 |
classical monocyte | 2.46e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.46e-17 | 42 |
defensive cell | 4.05e-15 | 48 |
phagocyte | 4.05e-15 | 48 |
blood cell | 2.02e-13 | 11 |
myeloid cell | 3.62e-13 | 108 |
common myeloid progenitor | 3.62e-13 | 108 |
leukocyte | 1.57e-12 | 136 |
monopoietic cell | 5.19e-12 | 59 |
monocyte | 5.19e-12 | 59 |
monoblast | 5.19e-12 | 59 |
promonocyte | 5.19e-12 | 59 |
macrophage dendritic cell progenitor | 1.31e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.04e-10 | 66 |
granulocyte monocyte progenitor cell | 1.52e-10 | 67 |
hematopoietic oligopotent progenitor cell | 1.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-10 | 161 |
hematopoietic stem cell | 5.96e-10 | 168 |
hematopoietic cell | 2.16e-09 | 177 |
nongranular leukocyte | 9.35e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.10e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.22e-11 | 98 |
blood island | 1.22e-11 | 98 |
hemolymphoid system | 1.70e-10 | 108 |
bone marrow | 2.96e-09 | 76 |
bone element | 1.50e-08 | 82 |
skeletal element | 9.39e-08 | 90 |
immune system | 1.72e-07 | 93 |
skeletal system | 6.20e-07 | 100 |