FFCP PHASE1:Hg19::chr2:61698345..61698408,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:61698345..61698408,- to FFCP PHASE1:Hg19::chr2:61698345..61698408,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9736 | |EntrezGene=9736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20066 | |HGNC=20066 | ||
|TSSclassifier=strong | |||
|UniProt=Q70CQ2 | |UniProt=Q70CQ2 | ||
|association_with_transcript=-441bp_to_ENST00000398571_5end | |||
|cluster_id=chr2:61698345..61698408,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_USP34_5end | |||
|id=chr2:61698345..61698408,- | |||
|ontology_enrichment_celltype=CL:0000738!2.57e-18!140;CL:0002087!3.73e-14!119;CL:0000037!8.38e-14!172;CL:0000566!8.38e-14!172;CL:0002031!4.15e-13!124;CL:0002032!1.19e-12!165;CL:0000837!1.19e-12!165;CL:0000766!3.43e-11!76;CL:0000988!4.51e-11!182;CL:0002057!3.25e-10!42;CL:0000557!6.14e-10!71;CL:0000860!6.30e-10!45;CL:0002009!3.25e-09!65;CL:0002194!1.26e-08!63;CL:0000576!1.26e-08!63;CL:0000040!1.26e-08!63;CL:0000559!1.26e-08!63;CL:0000839!7.36e-08!70;CL:0000763!7.85e-08!112;CL:0000049!7.85e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-11;33!CL:0002057;2.16e-11;33!CL:0000473;1.55e-07;39!CL:0000234;1.55e-07;39!CL:0000576;3.16e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.59e-18,136;CL:0002087,6.19e-14,115;CL:0000037,1.62e-13,168;CL:0002031,7.34e-13,120;CL:0002032,2.25e-12,161;CL:0000837,2.25e-12,161;CL:0000988,3.75e-11,177;CL:0000766,5.15e-11,72;CL:0000860,3.25e-10,42;CL:0002057,3.25e-10,42;CL:0000557,9.34e-10,67;CL:0002009,4.69e-09,61;CL:0002194,1.83e-08,59;CL:0000576,1.83e-08,59;CL:0000040,1.83e-08,59;CL:0000559,1.83e-08,59;CL:0000473,5.26e-08,48;CL:0000234,5.26e-08,48;CL:0000839,1.19e-07,66;CL:0000763,1.36e-07,108;CL:0000049,1.36e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.47e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-12!102;UBERON:0003061!1.49e-12!102;UBERON:0007023!1.74e-12!115;UBERON:0002193!1.80e-11!112;UBERON:0001474!1.69e-08!86;UBERON:0002371!2.06e-08!80;UBERON:0004765!4.37e-07!101;UBERON:0001434!4.37e-07!101;UBERON:0002405!5.88e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.47e-12,98;UBERON:0003061,2.47e-12,98;UBERON:0007023,3.35e-12,114;UBERON:0002193,3.13e-11,108;UBERON:0002405,1.48e-08,93;UBERON:0001474,2.83e-08,82;UBERON:0002371,3.40e-08,76 | |||
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| ||
|short_description=p2@USP34 | |||
}} | }} |
Latest revision as of 21:23, 17 September 2015
Short description: | p2@USP34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP34_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -441bp_to_ENST00000398571_5end |
EntrezGene: | USP34 |
HGNC: | 20066 |
UniProt: | Q70CQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.59e-18 | 136 |
nongranular leukocyte | 6.19e-14 | 115 |
hematopoietic stem cell | 1.62e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.34e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.25e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-12 | 161 |
hematopoietic cell | 3.75e-11 | 177 |
myeloid leukocyte | 5.15e-11 | 72 |
classical monocyte | 3.25e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.25e-10 | 42 |
granulocyte monocyte progenitor cell | 9.34e-10 | 67 |
macrophage dendritic cell progenitor | 4.69e-09 | 61 |
monopoietic cell | 1.83e-08 | 59 |
monocyte | 1.83e-08 | 59 |
monoblast | 1.83e-08 | 59 |
promonocyte | 1.83e-08 | 59 |
defensive cell | 5.26e-08 | 48 |
phagocyte | 5.26e-08 | 48 |
myeloid lineage restricted progenitor cell | 1.19e-07 | 66 |
myeloid cell | 1.36e-07 | 108 |
common myeloid progenitor | 1.36e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.47e-12 | 98 |
blood island | 2.47e-12 | 98 |
adult organism | 3.35e-12 | 114 |
hemolymphoid system | 3.13e-11 | 108 |
immune system | 1.48e-08 | 93 |
bone element | 2.83e-08 | 82 |
bone marrow | 3.40e-08 | 76 |