FFCP PHASE1:Hg19::chr3:101909187..101909198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:101909187..101909198,+ | |||
|coexpression_cluster_id=C195 | |||
|description=CAGE_peak_at_chr3:101909187..101909198,+ | |||
|id=chr3:101909187..101909198,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.60e-10!43;CL:0002621!1.71e-09!3;CL:0002368!5.23e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;4.42e-21;3!CL:0002076;4.12e-09;42!CL:0002368;1.31e-08;13!CL:0002174;3.57e-08;1!CL:0000501;3.57e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.37e-21,3;CL:0002076,3.23e-09,42;CL:0002368,1.43e-08,13;CL:0002174,3.34e-08,1;CL:0000501,3.34e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.10e-22!14;DOID:193!2.62e-13!29;DOID:120!3.24e-12!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.21e-38;14!DOID:193;9.53e-22;29!DOID:120;5.35e-19;27!DOID:3571;3.57e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.57e-38,14;DOID:193,1.03e-21,29;DOID:120,5.91e-19,27;DOID:3571,3.58e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!3.37e-14!5;UBERON:0004532!3.37e-14!5;UBERON:0000992!6.09e-13!13;UBERON:0001949!1.71e-09!3;UBERON:0004176!1.26e-08!22;UBERON:0000991!2.09e-07!21;UBERON:0009196!2.09e-07!21;UBERON:0009117!2.09e-07!21;UBERON:0005564!2.09e-07!21;UBERON:0002119!2.94e-07!4;UBERON:0004531!2.94e-07!4;UBERON:0003100!7.34e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;4.72e-25;13!UBERON:0002118;4.08e-22;5!UBERON:0001949;4.42e-21;3!UBERON:0002119;3.52e-16;4!UBERON:0000991;3.38e-15;21!UBERON:0003929;2.45e-09;7!UBERON:0003350;3.16e-08;8!UBERON:0001828;3.16e-08;8!UBERON:0003134;7.51e-08;33!UBERON:0003100;2.07e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,5.57e-25,13;UBERON:0002118,5.82e-22,5;UBERON:0001949,3.37e-21,3;UBERON:0002119,3.18e-16,4;UBERON:0000991,3.73e-15,21;UBERON:0009196,3.73e-15,21;UBERON:0009117,3.73e-15,21;UBERON:0005564,3.73e-15,21;UBERON:0004176,1.99e-14,22;UBERON:0003100,1.94e-09,41;UBERON:0003350,2.86e-08,8;UBERON:0001828,2.86e-08,8;UBERON:0003134,3.12e-08,37;UBERON:0000474,3.12e-08,37 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,1.72667283892012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,3.67195621010264,3.27295344709002,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75600456653801,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,1.41775097242386,1.07470227243418,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,1.20575750823834,22.6598699236076,1.49959486773086,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,1.60405176242628,0.184161977871793,0,0,0,0,0.462092022626489,0,0,1.58327443339314,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,3.8015530533025,2.11409074101617,10.8470805620397,1.31505115112215,0,0,0,0,0,0,0.9266210955196,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0.199679000498991,0,0,0,2.52209918479682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41850273138557,0,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3100704686229,2.69881867298163,2.48420731002015,0,1.32920857278997,2.60872530905867,0,0.380805212168795,1.22061219961398,3.63697318405119,0.429642228169954,2.32016879939247,7.5638218852737,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0.828864656652147,0.3414369541879,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:101909187..101909198,+ | |||
}} | }} |
Latest revision as of 13:49, 29 July 2015
Short description: | p@chr3:101909187..101909198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:101909187..101909198, + |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.37e-21 | 3 |
endo-epithelial cell | 3.23e-09 | 42 |
respiratory epithelial cell | 1.43e-08 | 13 |
follicular cell of ovary | 3.34e-08 | 1 |
granulosa cell | 3.34e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
female gonad | 5.57e-25 | 13 |
right ovary | 5.82e-22 | 5 |
gingival epithelium | 3.37e-21 | 3 |
left ovary | 3.18e-16 | 4 |
gonad | 3.73e-15 | 21 |
indifferent external genitalia | 3.73e-15 | 21 |
indifferent gonad | 3.73e-15 | 21 |
gonad primordium | 3.73e-15 | 21 |
external genitalia | 1.99e-14 | 22 |
female organism | 1.94e-09 | 41 |
epithelium of mucosa | 2.86e-08 | 8 |
gingiva | 2.86e-08 | 8 |
female reproductive organ | 3.12e-08 | 37 |
female reproductive system | 3.12e-08 | 37 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.57e-38 | 14 |
reproductive organ cancer | 1.03e-21 | 29 |
female reproductive organ cancer | 5.91e-19 | 27 |
liver cancer | 3.58e-08 | 1 |