FFCP PHASE1:Hg19::chr3:152017273..152017348,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:152017273..152017348,+ to FFCP PHASE1:Hg19::chr3:152017273..152017348,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4154 | |EntrezGene=4154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6923 | |HGNC=6923 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBW7,Q86UV8,C9JP00,Q96RE3,Q9NR56,Q86UV9 | |UniProt=E9PBW7,Q86UV8,C9JP00,Q96RE3,Q9NR56,Q86UV9 | ||
|association_with_transcript=79bp_to_ENST00000324196,ENST00000357472,ENST00000498502,ENST00000545754,NM_207293,NM_207294,NM_207295,NM_207296,NM_207297,uc003ezl.2,uc003ezm.2,uc003ezn.2,uc003ezo.2,uc003ezp.2_5end | |||
|cluster_id=chr3:152017273..152017348,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_12_at_MBNL1_5end | |||
|id=chr3:152017273..152017348,+ | |||
|ontology_enrichment_celltype=CL:0002032!6.18e-17!165;CL:0000837!6.18e-17!165;CL:0000738!1.05e-16!140;CL:0000037!1.59e-16!172;CL:0000566!1.59e-16!172;CL:0002087!5.11e-16!119;CL:0002057!1.19e-15!42;CL:0002031!4.33e-15!124;CL:0000860!1.13e-14!45;CL:0000766!1.63e-14!76;CL:0000988!5.29e-14!182;CL:0000763!7.18e-14!112;CL:0000049!7.18e-14!112;CL:0000839!9.17e-14!70;CL:0002194!3.95e-13!63;CL:0000576!3.95e-13!63;CL:0000040!3.95e-13!63;CL:0000559!3.95e-13!63;CL:0000557!5.98e-13!71;CL:0002009!1.67e-12!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-18;33!CL:0002057;2.44e-18;33!CL:0000473;3.02e-15;39!CL:0000234;3.02e-15;39!CL:0000576;4.87e-11;48!CL:0000766;5.23e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-20,42;CL:0002057,1.18e-20,42;CL:0000473,2.70e-20,48;CL:0000234,2.70e-20,48;CL:0000738,6.03e-17,136;CL:0000766,1.15e-16,72;CL:0002087,1.15e-16,115;CL:0000037,2.37e-16,168;CL:0002032,3.96e-16,161;CL:0000837,3.96e-16,161;CL:0000839,4.43e-15,66;CL:0002194,5.62e-15,59;CL:0000576,5.62e-15,59;CL:0000040,5.62e-15,59;CL:0000559,5.62e-15,59;CL:0002031,9.15e-15,120;CL:0000557,1.23e-14,67;CL:0000988,3.33e-14,177;CL:0000763,4.80e-14,108;CL:0000049,4.80e-14,108;CL:0002009,4.83e-14,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.15e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.89e-16!115;UBERON:0002390!3.32e-11!102;UBERON:0003061!3.32e-11!102;UBERON:0002371!1.75e-10!80;UBERON:0002193!6.54e-10!112;UBERON:0001474!1.05e-09!86;UBERON:0004765!4.17e-09!101;UBERON:0001434!4.17e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.16e-14,114;UBERON:0002390,7.20e-12,98;UBERON:0003061,7.20e-12,98;UBERON:0002371,7.70e-12,76;UBERON:0001474,1.24e-10,82;UBERON:0002193,2.18e-10,108;UBERON:0002405,1.77e-09,93;UBERON:0004765,4.17e-09,90;UBERON:0001434,5.88e-09,100 | |||
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| ||
|short_description=p12@MBNL1 | |||
}} | }} |
Latest revision as of 02:28, 16 September 2015
Short description: | p12@MBNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MBNL1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 79bp_to_ENST00000324196, ENST00000357472, ENST00000498502, ENST00000545754, NM_207293, NM_207294, NM_207295, NM_207296, NM_207297, uc003ezl.2, uc003ezm.2, uc003ezn.2, uc003ezo.2, uc003ezp.2_5end |
EntrezGene: | MBNL1 |
HGNC: | 6923 |
UniProt: | E9PBW7Q86UV8C9JP00Q96RE3Q9NR56Q86UV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-20 | 42 |
defensive cell | 2.70e-20 | 48 |
phagocyte | 2.70e-20 | 48 |
leukocyte | 6.03e-17 | 136 |
myeloid leukocyte | 1.15e-16 | 72 |
nongranular leukocyte | 1.15e-16 | 115 |
hematopoietic stem cell | 2.37e-16 | 168 |
hematopoietic oligopotent progenitor cell | 3.96e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.96e-16 | 161 |
myeloid lineage restricted progenitor cell | 4.43e-15 | 66 |
monopoietic cell | 5.62e-15 | 59 |
monocyte | 5.62e-15 | 59 |
monoblast | 5.62e-15 | 59 |
promonocyte | 5.62e-15 | 59 |
hematopoietic lineage restricted progenitor cell | 9.15e-15 | 120 |
granulocyte monocyte progenitor cell | 1.23e-14 | 67 |
hematopoietic cell | 3.33e-14 | 177 |
myeloid cell | 4.80e-14 | 108 |
common myeloid progenitor | 4.80e-14 | 108 |
macrophage dendritic cell progenitor | 4.83e-14 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.16e-14 | 114 |
hematopoietic system | 7.20e-12 | 98 |
blood island | 7.20e-12 | 98 |
bone marrow | 7.70e-12 | 76 |
bone element | 1.24e-10 | 82 |
hemolymphoid system | 2.18e-10 | 108 |
immune system | 1.77e-09 | 93 |
skeletal element | 4.17e-09 | 90 |
skeletal system | 5.88e-09 | 100 |