FFCP PHASE1:Hg19::chr3:16925999..16926015,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:16925999..16926015,+ to FFCP PHASE1:Hg19::chr3:16925999..16926015,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23228 | |EntrezGene=23228 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9064 | |HGNC=9064 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPR0 | |UniProt=Q9UPR0 | ||
|association_with_transcript=-436bp_to_ENST00000285094,ENST00000396755,ENST00000418129,NM_001144382,uc011awc.1_5end | |||
|cluster_id=chr3:16925999..16926015,+ | |||
|description=CAGE_peak_6_at_PLCL2_5end | |||
|id=chr3:16925999..16926015,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.58e-20!42;CL:0000860!1.48e-17!45;CL:0002087!9.01e-17!119;CL:0002031!1.65e-16!124;CL:0000839!1.70e-16!70;CL:0000557!1.03e-15!71;CL:0002194!1.06e-15!63;CL:0000576!1.06e-15!63;CL:0000040!1.06e-15!63;CL:0000559!1.06e-15!63;CL:0002009!1.93e-15!65;CL:0000766!3.65e-15!76;CL:0000738!1.04e-14!140;CL:0002032!2.45e-12!165;CL:0000837!2.45e-12!165;CL:0000037!3.98e-12!172;CL:0000566!3.98e-12!172;CL:0000988!1.30e-11!182;CL:0000763!3.33e-10!112;CL:0000049!3.33e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-20;33!CL:0002057;1.16e-20;33!CL:0000473;3.93e-19;39!CL:0000234;3.93e-19;39!CL:0000576;1.07e-11;48!CL:0000766;1.23e-10;69!CL:0000764;7.13e-07;2!CL:0000558;7.13e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.56e-23,48;CL:0000234,8.56e-23,48;CL:0000860,2.14e-21,42;CL:0002057,2.14e-21,42;CL:0000839,4.60e-18,66;CL:0002194,4.06e-17,59;CL:0000576,4.06e-17,59;CL:0000040,4.06e-17,59;CL:0000559,4.06e-17,59;CL:0000766,2.17e-16,72;CL:0002009,2.18e-16,61;CL:0000557,4.44e-16,67;CL:0000763,2.01e-13,108;CL:0000049,2.01e-13,108;CL:0002031,2.73e-11,120;CL:0002032,4.01e-10,161;CL:0000837,4.01e-10,161;CL:0002087,5.47e-10,115;CL:0000037,2.14e-09,168;CL:0000738,2.23e-09,136;CL:0000988,1.50e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.10e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.00e-19!115;UBERON:0002390!1.17e-17!102;UBERON:0003061!1.17e-17!102;UBERON:0002193!2.85e-15!112;UBERON:0002371!5.43e-14!80;UBERON:0001474!6.26e-14!86;UBERON:0001049!1.41e-11!57;UBERON:0005068!1.41e-11!57;UBERON:0006241!1.41e-11!57;UBERON:0007135!1.41e-11!57;UBERON:0004765!2.32e-11!101;UBERON:0001434!2.32e-11!101;UBERON:0002616!7.24e-09!59;UBERON:0002405!1.11e-08!115;UBERON:0001017!2.32e-08!82;UBERON:0002619!2.97e-08!22;UBERON:0002780!4.18e-08!41;UBERON:0001890!4.18e-08!41;UBERON:0006240!4.18e-08!41;UBERON:0005743!9.23e-08!86;UBERON:0003080!1.18e-07!42;UBERON:0000955!1.41e-07!69;UBERON:0006238!1.41e-07!69;UBERON:0001950!1.65e-07!20;UBERON:0002020!3.87e-07!34;UBERON:0003528!3.87e-07!34;UBERON:0001893!7.07e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.70e-11;9!UBERON:0001557;2.70e-11;9!UBERON:0000007;7.13e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.87e-15,76;UBERON:0001474,5.73e-15,82;UBERON:0004765,4.12e-13,90;UBERON:0002405,2.00e-12,93;UBERON:0002390,1.70e-11,98;UBERON:0003061,1.70e-11,98;UBERON:0001737,2.37e-11,9;UBERON:0001434,3.22e-11,100;UBERON:0002193,6.67e-10,108;UBERON:0000007,6.60e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.994192127183747,0,0.602694528023977,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0,0,0.305653622991805,0.0821005894499457,0.157421562627358,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,1.10799081706375,1.80490002723128,0.868043482863407,0.223915474239924,0.32389366601898,0,2.32637182047304,2.64513160582167,0.727752183563449,0.929716147622738,1.23350366406548,1.23882548358041,1.7261543539329,1.2808035326455,0,1.03423704220986,3.22742341791913,1.35426486594342,2.25890807451126,0.272906150057846,0.449446968890169,1.53041946185451,0.641858054152187,0,1.64925650093358,0.997318288108159,1.70489900213078,0.580418477257168,2.26954089876456,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,0.605399502633369,0.736555271975129,0,0.845021145247767,0.850417199860174,0.838634582033504,0.786300418025466,1.20141514273205,0.964353520182481,0.570025487482497,0.79566670879636,0.182664153764634,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,0,0,0,1.1384259382189,0,1.52909291250092,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.910415432919148,0,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.566546713487831,0,0.34362744548263,0,0,0,0,0.150575119077773,0.383959833463255,1.24930726552346,0,0.821127996921047,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0.860509862246441,0,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0,0.312160076830321,0,0.448346041655403,0,0,0.280901613404497,0.408308342509787,0,0.826606249406124,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.506328996723799,0.292311015483596,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,1.20505514941741,1.10293972732394,1.74303555273925,1.18635309555548,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0.099972991182057,0,2.00902836572851,2.10833939483032,0,0,0,0.144781306667579,0,0,0.336255431980582,0.394061520403854,0.431255149719035,0.641715181398742,0,0,0,0.167516265334349,1.27587750330633,0.749007023947182,0,2.48649308061621,0.24538298343828,0,0.813795071099207,0.207970861530807,0.178428988797162,0.630809660135739,0,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,0.862856803274467,0.320182673410333,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.771048469013278,0.177561725313127,0,1.03850885836724,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,1.31555925987561,1.0457418040996,0,0,0,0.515205058238611,0.54941678891006,0.660075999364704,0,0,0,0,0.462145851343933,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0.185803175125719,0.432807638929335,0.142283686696828,0.478278818186467,0.199579371432817,0,0,0,0,0,0,0,0.338583555603207,0,0.201799707191048,0,1.37402137902306,0.307240764308458,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0.614321404198464,0.994147647766298,0.140669416410513,0.445234820091624,0.16480387422676,0,0.597743964753209,0.276283915531148,0.755798243562828,0,0,0,0.179736702294654,0,0,0.197286811273867,0,0,2.90799823828566,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0.868124974666461,0,0.60298219312704,0,3.87027409759286,0.591095237907095,0.219385397153973,0,0,0.538651809526579,0,0,0,0.977826347298073,0.638002319463839,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0.593042257361244,0.370691816839509,0.730953646538188,0.202203398942031,0,1.1713222286267,0.7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| ||
|short_description=p6@PLCL2 | |||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p6@PLCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | -436bp_to_ENST00000285094, ENST00000396755, ENST00000418129, NM_001144382, uc011awc.1_5end |
EntrezGene: | PLCL2 |
HGNC: | 9064 |
UniProt: | Q9UPR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.56e-23 | 48 |
phagocyte | 8.56e-23 | 48 |
classical monocyte | 2.14e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.14e-21 | 42 |
myeloid lineage restricted progenitor cell | 4.60e-18 | 66 |
monopoietic cell | 4.06e-17 | 59 |
monocyte | 4.06e-17 | 59 |
monoblast | 4.06e-17 | 59 |
promonocyte | 4.06e-17 | 59 |
myeloid leukocyte | 2.17e-16 | 72 |
macrophage dendritic cell progenitor | 2.18e-16 | 61 |
granulocyte monocyte progenitor cell | 4.44e-16 | 67 |
myeloid cell | 2.01e-13 | 108 |
common myeloid progenitor | 2.01e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 2.73e-11 | 120 |
hematopoietic oligopotent progenitor cell | 4.01e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.01e-10 | 161 |
nongranular leukocyte | 5.47e-10 | 115 |
hematopoietic stem cell | 2.14e-09 | 168 |
leukocyte | 2.23e-09 | 136 |
hematopoietic cell | 1.50e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.87e-15 | 76 |
bone element | 5.73e-15 | 82 |
skeletal element | 4.12e-13 | 90 |
immune system | 2.00e-12 | 93 |
hematopoietic system | 1.70e-11 | 98 |
blood island | 1.70e-11 | 98 |
larynx | 2.37e-11 | 9 |
skeletal system | 3.22e-11 | 100 |
hemolymphoid system | 6.67e-10 | 108 |
pituitary gland | 6.60e-07 | 2 |