FFCP PHASE1:Hg19::chr3:183005587..183005601,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:183005587..183005601,+ to FFCP PHASE1:Hg19::chr3:183005587..183005601,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=319bp_to_ENST00000462559,uc003fln.1_5end | |||
|cluster_id=chr3:183005587..183005601,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_11_at_B3GNT5_5end | |||
|id=chr3:183005587..183005601,+ | |||
|ontology_enrichment_celltype=CL:0000680!9.38e-17!57;CL:0000056!9.38e-17!57;CL:0000355!9.38e-17!57;CL:0000187!1.21e-15!54;CL:0000183!2.71e-15!59;CL:0000393!3.03e-14!60;CL:0000211!3.03e-14!60;CL:0000860!3.43e-12!45;CL:0000192!1.43e-11!42;CL:0000514!1.43e-11!42;CL:0002057!2.27e-11!42;CL:0000359!7.53e-11!32;CL:0000055!3.60e-10!180;CL:0000048!1.33e-08!430;CL:0000723!3.64e-08!436;CL:0002371!1.43e-07!591;CL:0000034!2.69e-07!444;CL:0002494!2.76e-07!16;CL:0000144!4.61e-07!625;CL:0002194!6.39e-07!63;CL:0000576!6.39e-07!63;CL:0000040!6.39e-07!63;CL:0000559!6.39e-07!63;CL:0000548!7.26e-07!679;CL:0000004!7.26e-07!679;CL:0000255!7.26e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.02e-13;33!CL:0002057;6.02e-13;33!CL:0000473;7.26e-09;39!CL:0000234;7.26e-09;39!CL:0000187;1.61e-07;55!CL:0000188;5.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,4.71e-12,55;CL:0000680,4.24e-11,58;CL:0000056,4.24e-11,58;CL:0000355,4.24e-11,58;CL:0000393,3.03e-10,61;CL:0000211,3.03e-10,61;CL:0000860,5.83e-10,42;CL:0002057,5.83e-10,42;CL:0000192,1.41e-08,43;CL:0000514,1.41e-08,43;CL:0000473,3.93e-08,48;CL:0000234,3.93e-08,48;CL:0000188,5.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;2.10e-07;58!CL:0002057;8.06e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.57e-20!83;UBERON:0002329!4.57e-20!83;UBERON:0003077!4.57e-20!83;UBERON:0003059!4.57e-20!83;UBERON:0007282!4.57e-20!83;UBERON:0009618!4.57e-20!83;UBERON:0007285!4.57e-20!83;UBERON:0004290!2.41e-19!70;UBERON:0001134!3.52e-18!61;UBERON:0002036!3.52e-18!61;UBERON:0003082!3.52e-18!61;UBERON:0002385!4.96e-17!63;UBERON:0001015!4.96e-17!63;UBERON:0000383!4.96e-17!63;UBERON:0002204!9.07e-16!167;UBERON:0000486!7.99e-15!82;UBERON:0005256!7.85e-12!143;UBERON:0000926!4.27e-10!448;UBERON:0004120!4.27e-10!448;UBERON:0006603!4.27e-10!448;UBERON:0000923!1.10e-08!604;UBERON:0005291!1.10e-08!604;UBERON:0006598!1.10e-08!604;UBERON:0002532!1.10e-08!604;UBERON:0002050!1.42e-08!605;UBERON:0005423!1.42e-08!605;UBERON:0000490!2.33e-08!138;UBERON:0000922!8.14e-08!612;UBERON:0001637!2.91e-07!42;UBERON:0003509!2.91e-07!42;UBERON:0004572!2.91e-07!42;UBERON:0002049!6.48e-07!79;UBERON:0007798!6.48e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;3.38e-08;31!UBERON:0001015;3.38e-08;31!UBERON:0000383;3.38e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.04e-13,71;UBERON:0003059,2.04e-13,71;UBERON:0007282,2.04e-13,71;UBERON:0004290,2.04e-13,71;UBERON:0009618,2.04e-13,71;UBERON:0003077,4.05e-13,72;UBERON:0007285,4.05e-13,72;UBERON:0007524,7.89e-13,73;UBERON:0001134,1.55e-12,62;UBERON:0002036,1.55e-12,62;UBERON:0003082,1.55e-12,62;UBERON:0002204,6.29e-12,167;UBERON:0002385,6.35e-12,64;UBERON:0001015,6.35e-12,64;UBERON:0000383,6.35e-12,64;UBERON:0007503,1.67e-11,78;UBERON:0000486,2.39e-10,83;UBERON:0005256,2.65e-09,122;UBERON:0000926,4.97e-08,315;UBERON:0004120,4.97e-08,315;UBERON:0006603,4.97e-08,315;UBERON:0003104,7.06e-08,160;UBERON:0009142,7.06e-08,160;UBERON:0000490,8.04e-08,148 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0,0,0,5.68547886084148,0.261185628199839,0,0,0,0,6.93091576576261,1.65698687863958,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,1.47901604066715,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0.377875943688809,0.485168122375632,0.232429036905685,0.822335776043652,2.16794459626573,1.43846196161075,2.30544635876191,1.6553756092201,4.13694816883942,4.51839278508678,2.70852973188684,0.376484679085209,0.272906150057846,0.449446968890169,6.42776173978895,5.45579346029359,4.47535988059329,0.659702600373432,0.997318288108159,1.27867425159808,4.35313857942876,3.97169657283798,2.4912889959823,2.00998932205395,0.521482918420201,0.434377689410233,1.81619850790011,3.31449872388808,2.84816148696796,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,1.45650098894541,0.286836620748814,0.354668382198357,0,1.06748995729705,2.22000793575444,0.622422070799533,2.42479209725439,0.490385709340376,0.454072282934794,3.45705554687999,3.28050004567315,4.05808099879417,1.1409436430889,7.32298534703825,0.939475989150119,0.323745888736263,0.140450806702248,3.26646674007829,0.368502951935304,4.23635702820638,0,0,0,2.87447256726495,0.673344455816265,0.500474079487857,0.554128230968366,0,0,0,1.47461838108027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0.185176890317059,1.3032332212413,1.03993478527958,0,0,0.70445216541493,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.560655421726804,0,0.95339771567235,0,0,2.535908257668,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0.977208552881205,1.06617584622764,1.58390374586686,0.602878754119172,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.579125226670317,0.821905290201534,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0,0,0,0.49076596687656,2.00068208423871,4.06897535549603,0,0,0,0,0,0,5.17365356462525,0,0.184369168541703,0,0.195801157462741,0.686286847621712,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0.98552587216571,3.11552657510173,0.464841513839837,0,0,0.460404944679482,0.459257792658427,0.182091168006717,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,1.64340221096607,2.46477787383431,4.1445992176055,0.827019434907183,5.15617175367713,1.16013355131383,3.57951835147624,0.534192213880424,2.31398881505369,1.53752053892085,2.04180339991335,2.6301023022443,0,0,3.485186350803,2.46426864140871,1.59691809095107,0.869932992075073,0.55597265731176,1.43124886741991,1.86079184679834,1.58189712359363,0.190630193923825,1.27948895655667,7.27496279657665,1.90921948755562,2.35484592059769,0,0.54907405947211,1.17812402345686,0.404364963146632,3.17020642346017,1.68503382495592,0.48763373908959,1.21856744815642,0,0,0,0,0,0.66343897524122,0.438450885253763,1.15755106853338,9.83842128069949,0.202910376962704,0.92947049429925,0.281695602532241,0.573645408816206,0.687743287091848,0.35667105148125,0,0,0,1.13841952129715,1.74967360122491,0,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,2.50634477090067,0,0,0,0,1.37402137902306,0.921722292925374,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,6.12197877625982,0,0,0.19924798825107,0,0,0,0,0,0,1.25314822272926,0,0,0,0,0,0,0,0,2.18649999990489,0,0.1137934482855,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0,1.82307289355202,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.503464760927528,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0.330991955875499,0.627865836814451,3.58417289318877,0,0.277349346026277,0,0.391969589657511,0,0.17472666824203,0,0.483781656445426,0.511625219603299,0.164230914106418,0.387956065953678,0,0,4.65942543798953,0.596143835108969,0.0633107959558787,0,0.721429382263803,0,0,0,0,0,0.14405479798815,0.372757606696298,2.12124631155116,0.67952103036807,0.627617077873999,0.407992870545287,0.866851769704557,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,5.01980155725219,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07572403599707,0,0,0,0,3.25799761052228,0.864221491201268,2.28611152076586,0,1.06720276974141,0,0,2.34483573884932,0,0.387848869084652,0,0.513260513652988,0,0,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0.612691153526923,0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| 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| ||
|short_description=p11@B3GNT5 | |||
}} | }} |
Latest revision as of 23:59, 16 September 2015
Short description: | p11@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_B3GNT5_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 319bp_to_ENST00000462559, uc003fln.1_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 4.71e-12 | 55 |
muscle precursor cell | 4.24e-11 | 58 |
myoblast | 4.24e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.24e-11 | 58 |
electrically responsive cell | 3.03e-10 | 61 |
electrically active cell | 3.03e-10 | 61 |
classical monocyte | 5.83e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.83e-10 | 42 |
smooth muscle cell | 1.41e-08 | 43 |
smooth muscle myoblast | 1.41e-08 | 43 |
defensive cell | 3.93e-08 | 48 |
phagocyte | 3.93e-08 | 48 |
cell of skeletal muscle | 5.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
somite | 2.04e-13 | 71 |
presomitic mesoderm | 2.04e-13 | 71 |
presumptive segmental plate | 2.04e-13 | 71 |
dermomyotome | 2.04e-13 | 71 |
trunk paraxial mesoderm | 2.04e-13 | 71 |
paraxial mesoderm | 4.05e-13 | 72 |
presumptive paraxial mesoderm | 4.05e-13 | 72 |
dense mesenchyme tissue | 7.89e-13 | 73 |
skeletal muscle tissue | 1.55e-12 | 62 |
striated muscle tissue | 1.55e-12 | 62 |
myotome | 1.55e-12 | 62 |
musculoskeletal system | 6.29e-12 | 167 |
muscle tissue | 6.35e-12 | 64 |
musculature | 6.35e-12 | 64 |
musculature of body | 6.35e-12 | 64 |
epithelial vesicle | 1.67e-11 | 78 |
multilaminar epithelium | 2.39e-10 | 83 |
trunk mesenchyme | 2.65e-09 | 122 |
mesoderm | 4.97e-08 | 315 |
mesoderm-derived structure | 4.97e-08 | 315 |
presumptive mesoderm | 4.97e-08 | 315 |
mesenchyme | 7.06e-08 | 160 |
entire embryonic mesenchyme | 7.06e-08 | 160 |
unilaminar epithelium | 8.04e-08 | 148 |