FFCP PHASE1:Hg19::chr3:71355163..71355209,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:71355163..71355209,- to FFCP PHASE1:Hg19::chr3:71355163..71355209,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000470112_5end | |||
|cluster_id=chr3:71355163..71355209,- | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_5_at_FOXP1_5end | |||
|id=chr3:71355163..71355209,- | |||
|ontology_enrichment_celltype=CL:0000791!1.30e-10!18;CL:0000789!1.30e-10!18;CL:0002420!1.30e-10!18;CL:0002419!1.30e-10!18;CL:0000790!1.30e-10!18;CL:0000542!9.35e-10!53;CL:0000051!9.35e-10!53;CL:0000838!2.04e-09!52;CL:0000625!5.41e-08!11;CL:0000084!7.04e-08!25;CL:0000827!7.04e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.08e-14;18!CL:0000789;4.08e-14;18!CL:0002419;4.08e-14;18!CL:0000084;2.89e-10;25!CL:0000625;3.70e-10;11!CL:0000542;8.53e-10;53!CL:0000236;3.01e-09;13!CL:0000624;7.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.40e-15,53;CL:0000051,2.40e-15,53;CL:0000838,7.23e-15,52;CL:0000791,4.14e-14,18;CL:0000789,4.14e-14,18;CL:0002420,4.14e-14,18;CL:0002419,4.14e-14,18;CL:0000790,4.14e-14,18;CL:0000084,2.58e-10,25;CL:0000827,2.58e-10,25;CL:0000625,3.67e-10,11;CL:0000236,3.01e-08,14;CL:0000037,5.62e-07,168;CL:0000624,7.65e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.08e-14;18!CL:0000051;8.53e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!8.64e-10!113;UBERON:0004535!9.03e-10!110;UBERON:0002049!3.53e-07!79;UBERON:0007798!3.53e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.58e-07;15!UBERON:0000179;1.58e-07;15!UBERON:0000463;1.58e-07;15!UBERON:0000922;6.29e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.66e-08,109;UBERON:0000178,1.61e-07,15;UBERON:0000179,1.61e-07,15;UBERON:0000463,1.61e-07,15;UBERON:0001009,1.99e-07,112 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.218441372130172,0,1.11389717664042,0.994192127183747,0.672325146451775,0.602694528023977,2.19093027116212,0.487932798790507,0.861847406537515,0.408001382488506,1.25381888591235,0.572471974262113,0.410623275218653,0.627713197974014,0,0,0,3.14691421479123,1.53531759238885,5.88301268601089,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,2.34880351467878,5.53995408531877,5.81578897663411,5.4252717678963,0.223915474239924,3.56283032620878,0.77272670290256,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0,1.03423704220986,1.93645405075148,1.35426486594342,0.188242339542605,1.36453075028923,0,0.306083892370903,0.962787081228281,0,0,0.598390972864896,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,1.84138817993782,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,70.3984977845291,92.8435639145624,71.1607403090844,68.2768356106412,77.6768214849864,89.0866281929449,74.6980706246894,73.462139099223,129.211343987845,115.685726306075,125.385618825075,19.8256992868539,18.4967825783907,4.47752944117631,45.8333764365231,52.6634422083881,43.3819162888964,35.2763505274331,199.464427179757,198.374630602853,150.016580874092,7.91014243884732,69.2323882565867,67.7893717425881,88.8236673149251,11.0158534964081,15.2169436645058,26.6389405457955,18.7918012094377,38.833613488497,116.553238645379,124.138944233627,102.444813328877,3.05935225283429,21.4603476417076,23.7102937383015,15.6872209052092,26.4409293889,24.7411712465439,24.7117531556577,40.8058572700764,39.5478628467153,36.2299107001803,24.6248342125778,19.7070719261051,24.1928091869679,5.61624411145365,40.6956574910665,2.43806866313962,0.670700859703636,0.511450247374121,0.722878304769133,2.50668955317945,0.579386075843295,0.795285947051099,0.486634870302636,5.67208902984407,5.5432349365641,5.88493064143945,2.42311289670768,0,0,1.29818957461873,1.56716763569341,0.797747763113191,7.63169997777094,5.71994910780128,4.82894751728434,0.596287222100115,0,0,1.13061588384802,1.67799774483962,0.275118041940067,0.835979866147242,2.06733407335463,1.06729878806013,2.67776490211736,0,0,0.976248230192678,1.47065232138347,0.81014194788176,3.57198913136319,1.12264686313085,3.26573293401634,1.53316637465883,2.84779697870439,0.732806975721629,2.63560834872127,0,0,1.98788780678127,1.39293562831038,1.72131935057184,3.15520282823695,1.06400514659507,0,0,1.48000529050296,0.622422070799533,1.48181739276657,0.163461903113459,3.78393569112329,5.18558332031999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0,0.193260853163297,0.272746120590835,0,14.0269762049035,24.1204178345103,13.9432731443422,8.29288440122964,17.662459561294,28.4682340079147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0.4115740113314,0,1.26755034821831,0,2.95394953340702,0,11.929878538682,2.40194934417936,0,0,0,1.38882667737794,0,0,7.21656710126366,3.70977295920246,3.87448690978212,4.04226053731007,2.31492756288305,5.13686211033415,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0.358234090811393,0.290633938513962,0.383382679165211,3.94130590316755,0.880484340132261,0.621984346622316,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,1.68196626518041,0.43596006883328,2.2001485746285,1.68053230485111,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0.399891964728228,0,0,0,0.718874566474748,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,19.3090144997889,16.8189508390424,10.5241289749394,0,0,0,0.167516265334349,0.637938751653163,0.749007023947182,0,2.48649308061621,0.858840442033979,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,1.65932251687533,0,0,1.02943027143257,54.3799908703194,44.0056969669978,31.1644468786057,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0,0,0.321707842287215,1.48418066444991,0.154209693802656,0.710246901252508,0.492762936082855,0.519254429183621,0.232420756919918,7.73500477386382,0.200506470303285,0.0920809889358963,1.60740227430449,0.182091168006717,1.96686622439136,0.902399225814824,4.92898157468254,3.92174884588428,0,3.69430701125065,0,0.170093705276516,0.647747748306418,1.54227252690289,0.270946437543853,1.00337954770971,0,0,1.79099803777743,1.53481913652154,0.522870902049801,0.256450125116389,1.64007322849853,0.976135183992909,1.13345112812495,0,0,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.623224249527161,0.495854746082934,0.384380134730212,1.91419068741876,0.50578890427775,1.39453664789186,2.83331112147576,2.0911118104818,0.308033580176089,0.532306030317022,0,0.37064843820784,2.43312307461385,2.232950216158,1.58189712359363,1.334411357466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| ||
|short_description=p5@FOXP1 | |||
}} | }} |
Latest revision as of 13:32, 19 September 2015
Short description: | p5@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXP1_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 0bp_to_ENST00000470112_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.40e-15 | 53 |
common lymphoid progenitor | 2.40e-15 | 53 |
lymphoid lineage restricted progenitor cell | 7.23e-15 | 52 |
mature alpha-beta T cell | 4.14e-14 | 18 |
alpha-beta T cell | 4.14e-14 | 18 |
immature T cell | 4.14e-14 | 18 |
mature T cell | 4.14e-14 | 18 |
immature alpha-beta T cell | 4.14e-14 | 18 |
T cell | 2.58e-10 | 25 |
pro-T cell | 2.58e-10 | 25 |
CD8-positive, alpha-beta T cell | 3.67e-10 | 11 |
B cell | 3.01e-08 | 14 |
hematopoietic stem cell | 5.62e-07 | 168 |
CD4-positive, alpha-beta T cell | 7.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.66e-08 | 109 |
blood | 1.61e-07 | 15 |
haemolymphatic fluid | 1.61e-07 | 15 |
organism substance | 1.61e-07 | 15 |
circulatory system | 1.99e-07 | 112 |