FFCP PHASE1:Hg19::chr4:119810242..119810263,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:119810242..119810263,+ to FFCP PHASE1:Hg19::chr4:119810242..119810263,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=171024 | |EntrezGene=171024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17732 | |HGNC=17732 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMS6 | |UniProt=Q9UMS6 | ||
|association_with_transcript=50bp_to_EU481975_5end | |||
|cluster_id=chr4:119810242..119810263,+ | |||
|coexpression_cluster_id=C2554 | |||
|description=CAGE_peak_11_at_SYNPO2_5end | |||
|id=chr4:119810242..119810263,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.14e-07;1!CL:0000501;1.14e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,7.97e-08,1;CL:0000501,7.97e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.25e-14;2!UBERON:0004874;3.20e-08;1!UBERON:0000358;4.98e-08;1!UBERON:0009143;4.98e-08;1!UBERON:0005754;4.98e-08;1!UBERON:0001045;1.14e-07;1!UBERON:0008801;1.14e-07;1!UBERON:0010226;1.14e-07;1!UBERON:0006242;1.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.90e-14;2!DOID:178;1.14e-07;1!DOID:326;1.14e-07;1!DOID:3978;1.14e-07;1!DOID:3394;1.14e-07;1!DOID:5844;1.14e-07;1!DOID:1287;1.47e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.21e-14,2;DOID:178,1.26e-07,1;DOID:326,1.26e-07,1;DOID:3978,1.26e-07,1;DOID:3394,1.26e-07,1;DOID:5844,1.26e-07,1;DOID:1287,1.54e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.64e-54!115;UBERON:0002020!8.15e-13!34;UBERON:0003528!8.15e-13!34;UBERON:0001893!1.35e-12!34;UBERON:0001869!4.06e-12!32;UBERON:0002780!4.12e-12!41;UBERON:0001890!4.12e-12!41;UBERON:0006240!4.12e-12!41;UBERON:0001049!5.91e-12!57;UBERON:0005068!5.91e-12!57;UBERON:0006241!5.91e-12!57;UBERON:0007135!5.91e-12!57;UBERON:0002791!7.85e-12!33;UBERON:0003080!1.09e-11!42;UBERON:0003075!4.97e-11!86;UBERON:0007284!4.97e-11!86;UBERON:0002616!2.58e-10!59;UBERON:0000955!3.06e-10!69;UBERON:0006238!3.06e-10!69;UBERON:0002346!3.73e-10!90;UBERON:0005743!9.16e-10!86;UBERON:0001017!9.42e-10!82;UBERON:0000073!1.60e-09!94;UBERON:0001016!1.60e-09!94;UBERON:0000062!4.08e-09!511;UBERON:0000468!4.23e-09!659;UBERON:0000153!4.40e-09!129;UBERON:0007811!4.40e-09!129;UBERON:0002619!5.23e-09!22;UBERON:0000059!8.99e-09!11;UBERON:0001155!2.04e-08!9;UBERON:0003056!6.21e-08!61;UBERON:0000956!1.34e-07!25;UBERON:0000203!1.34e-07!25;UBERON:0000467!1.99e-07!625;UBERON:0002308!2.08e-07!9;UBERON:0000125!2.08e-07!9;UBERON:0000480!2.26e-07!626;UBERON:0000033!2.41e-07!123;UBERON:0000064!2.83e-07!219;UBERON:0009663!3.21e-07!7;UBERON:0002420!3.37e-07!9;UBERON:0007245!3.37e-07!9;UBERON:0010009!3.37e-07!9;UBERON:0010011!3.37e-07!9;UBERON:0000454!3.37e-07!9;UBERON:0001950!4.51e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.68e-20;3!UBERON:0004054;2.68e-20;3!UBERON:0005904;2.27e-15;4!UBERON:0003135;7.63e-10;11!UBERON:0000160;7.46e-09;17!UBERON:0000989;3.20e-08;1!UBERON:0008811;3.20e-08;1!UBERON:0002146;3.80e-08;1!UBERON:0005623;3.80e-08;1!UBERON:0005795;4.98e-08;1!UBERON:0001000;4.98e-08;1!UBERON:0000998;4.98e-08;1!UBERON:0006868;4.98e-08;1!UBERON:0005352;4.98e-08;1!UBERON:0004921;7.52e-08;33!UBERON:0000029;1.14e-07;1!UBERON:0002084;1.14e-07;1!UBERON:0001154;1.14e-07;1!UBERON:0001831;1.14e-07;1!UBERON:0001301;1.14e-07;1!UBERON:0001153;1.14e-07;1!UBERON:0009854;1.14e-07;1!UBERON:0002082;1.14e-07;1!UBERON:0001567;1.14e-07;1!UBERON:0001155;5.54e-07;9!UBERON:0005409;7.07e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.26e-21,114;UBERON:0006947,2.14e-20,3;UBERON:0004054,2.14e-20,3;UBERON:0005904,1.92e-15,4;UBERON:0003135,6.97e-10,11;UBERON:0000160,6.46e-09,17;UBERON:0000989,3.10e-08,1;UBERON:0008811,3.10e-08,1;UBERON:0006258,3.10e-08,1;UBERON:0005876,3.10e-08,1;UBERON:0004874,3.10e-08,1;UBERON:0002146,3.80e-08,1;UBERON:0005623,3.80e-08,1;UBERON:0000998,4.35e-08,1;UBERON:0006868,4.35e-08,1;UBERON:0001000,4.66e-08,1;UBERON:0005352,4.66e-08,1;UBERON:0000029,6.52e-08,1;UBERON:0001154,8.51e-08,1;UBERON:0001153,8.51e-08,1;UBERON:0001045,8.51e-08,1;UBERON:0002084,9.72e-08,1;UBERON:0002082,9.72e-08,1;UBERON:0010226,9.72e-08,1;UBERON:0001301,1.11e-07,1;UBERON:0001831,1.64e-07,1;UBERON:0001567,1.64e-07,1;UBERON:0008801,1.64e-07,1;UBERON:0001155,4.80e-07,9 | |||
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| ||
|short_description=p11@SYNPO2 | |||
}} | }} |
Latest revision as of 21:32, 24 September 2015
Short description: | p11@SYNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SYNPO2_5end |
Coexpression cluster: | C2554_smooth_heart_aorta_penis_seminal_bladder_left |
Association with transcript: | 50bp_to_EU481975_5end |
EntrezGene: | SYNPO2 |
HGNC: | 17732 |
UniProt: | Q9UMS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 7.97e-08 | 1 |
granulosa cell | 7.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.26e-21 | 114 |
male genital duct | 2.14e-20 | 3 |
internal male genitalia | 2.14e-20 | 3 |
duct of male reproductive system | 1.92e-15 | 4 |
male reproductive organ | 6.97e-10 | 11 |
intestine | 6.46e-09 | 17 |
penis | 3.10e-08 | 1 |
intromittent organ | 3.10e-08 | 1 |
lateral plate mesenchyme | 3.10e-08 | 1 |
undifferentiated genital tubercle | 3.10e-08 | 1 |
somatopleure | 3.10e-08 | 1 |
pulmonary valve | 3.80e-08 | 1 |
semi-lunar valve | 3.80e-08 | 1 |
seminal vesicle | 4.35e-08 | 1 |
seminal fluid secreting gland | 4.35e-08 | 1 |
vas deferens | 4.66e-08 | 1 |
spermatic cord | 4.66e-08 | 1 |
lymph node | 6.52e-08 | 1 |
vermiform appendix | 8.51e-08 | 1 |
caecum | 8.51e-08 | 1 |
midgut | 8.51e-08 | 1 |
heart left ventricle | 9.72e-08 | 1 |
cardiac ventricle | 9.72e-08 | 1 |
future cardiac ventricle | 9.72e-08 | 1 |
epididymis | 1.11e-07 | 1 |
parotid gland | 1.64e-07 | 1 |
cheek | 1.64e-07 | 1 |
parotid gland primordium | 1.64e-07 | 1 |
colon | 4.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.21e-14 | 2 |
vascular disease | 1.26e-07 | 1 |
ischemia | 1.26e-07 | 1 |
extrinsic cardiomyopathy | 1.26e-07 | 1 |
myocardial ischemia | 1.26e-07 | 1 |
myocardial infarction | 1.26e-07 | 1 |
cardiovascular system disease | 1.54e-07 | 4 |