FFCP PHASE1:Hg19::chr4:139163058..139163082,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:139163058..139163082,- to FFCP PHASE1:Hg19::chr4:139163058..139163082,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23657 | |EntrezGene=23657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11059 | |HGNC=11059 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPY5 | |UniProt=Q9UPY5 | ||
|association_with_transcript=140bp_to_AB385133,AJ277882,JF432710_5end | |||
|cluster_id=chr4:139163058..139163082,- | |||
|coexpression_cluster_id=C1426 | |||
|description=CAGE_peak_8_at_SLC7A11_5end | |||
|id=chr4:139163058..139163082,- | |||
|ontology_enrichment_celltype=CL:0000860!1.12e-15!45;CL:0002057!2.40e-14!42;CL:0002009!1.26e-12!65;CL:0002194!1.29e-12!63;CL:0000576!1.29e-12!63;CL:0000040!1.29e-12!63;CL:0000559!1.29e-12!63;CL:0000839!2.56e-10!70;CL:0000557!3.51e-10!71;CL:0000766!7.68e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.23e-79;33!CL:0002057;5.23e-79;33!CL:0000473;4.61e-54;39!CL:0000234;4.61e-54;39!CL:0000576;4.40e-36;48!CL:0000766;2.24e-18;69!CL:0000763;3.52e-10;100!CL:0002087;1.45e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.38e-66,42;CL:0002057,1.38e-66,42;CL:0000473,3.24e-57,48;CL:0000234,3.24e-57,48;CL:0002194,4.17e-44,59;CL:0000576,4.17e-44,59;CL:0000040,4.17e-44,59;CL:0000559,4.17e-44,59;CL:0002009,2.04e-42,61;CL:0000839,1.24e-38,66;CL:0000557,6.08e-38,67;CL:0000766,8.85e-35,72;CL:0000763,7.94e-24,108;CL:0000049,7.94e-24,108;CL:0002087,6.83e-19,115;CL:0002031,8.72e-18,120;CL:0000738,5.74e-16,136;CL:0002032,2.54e-13,161;CL:0000837,2.54e-13,161;CL:0000037,1.94e-12,168;CL:0000988,2.08e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.52e-50;42!CL:0000049;7.05e-09;108 | |||
|ontology_enrichment_disease=DOID:305!7.35e-11!106;DOID:0050687!1.23e-09!143;DOID:14566!3.61e-07!239;DOID:162!7.06e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.20e-08!86;UBERON:0002371!6.75e-08!80;UBERON:0004765!4.52e-07!101;UBERON:0001434!4.52e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-32,76;UBERON:0001474,1.33e-29,82;UBERON:0004765,2.77e-26,90;UBERON:0002405,3.47e-25,93;UBERON:0002390,1.66e-23,98;UBERON:0003061,1.66e-23,98;UBERON:0001434,6.99e-23,100;UBERON:0002193,1.29e-20,108;UBERON:0002204,1.46e-13,167;UBERON:0003081,3.64e-13,203 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,2.03557534291391,1.13362783106643,1.94067248950253,2.09186133215116,5.34518254428373,2.16794459626573,6.90461741573161,3.84241059793651,3.78371567821736,1.37898272294647,2.5819387343353,2.70852973188684,2.25890807451126,3.27487380069415,4.04502272001152,2.44867113896722,3.85114832491312,3.83602275479425,4.28806690242731,4.18873681005427,2.13112375266347,3.48251086354301,3.97169657283798,4.35975574296902,5.27622197039161,3.65038042894141,2.6062661364614,3.63239701580021,3.31449872388808,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,0.50133791063589,0.579386075843295,0,0,0,0,0,0,0,0,0,0.174129737299267,0.797747763113191,0,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,1.04497483268405,0.516833518338658,0,0,0.402829317109147,0,0,1.10298924103761,0,0.535798369704479,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,0,0.560677600142307,0,0,0,1.21239604862719,0.490385709340376,0,0,0.234321431833797,0,0,0,0.704606991862589,0.323745888736263,0,0.204154171254893,0,0.619954687054593,1.18800285728205,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0.717558542755448,0.640672166455702,0,0.600182192168805,0.618315175430633,0,0.558350568994769,0.337552664482532,0.292311015483596,0,0.0920498986422993,0.161646056818812,1.42003837006646,0.201504196455281,0,0,0,0,0.853815942907168,0.662648841607426,0.232387885739037,0.414644220061482,1.51392510525377,0.72995471815166,0,0,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.441175890929576,0.653638332277218,0.237270619111097,0.269662616320329,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.603173834469785,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0.87192013766656,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,1.96271887676878,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.736647911487171,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,0.826424576804891,0,0.382838137483752,1.2138933702666,0,1.5740617341532,0,0,0,0,0,0.715624433709956,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,1.05650146756755,0.409499734223957,0.848432591722276,1.13008116620243,0,0,0.438450885253763,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,1.22520107990516,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,1.4098700508785,0.561421621224659,0,0,0,0,0,0,0,0,0.140669416410513,0.556543525114529,0,0.63337622438398,0,0,0,0,0,0,0,1.25314822272926,0,0,0,0,0.969332746095218,0.463840490809256,3.99227596002388,0,0,0,1.137934482855,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0.21787692703798,0.139423744278603,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0.421996129056054,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0.404406797884062,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0.751617097072463,0,0,0.992975867626496,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0.483781656445426,0.511625219603299,0.492692742319255,0,0.617792886840502,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0.39961921916426,0.288180834308212,1.60351234632282,0.343189995723929,0.288109595976299,0,0.707082103850386,0.135904206073614,0,2.3459590056354,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.393915911536118,0.329663433524666,0.337017719270924,0.492137407573744,0.338693328263138,0,0.272406812223151,0.16075314846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| ||
|short_description=p8@SLC7A11 | |||
}} | }} |
Latest revision as of 05:40, 25 September 2015
Short description: | p8@SLC7A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC7A11_5end |
Coexpression cluster: | C1426_CD14_bile_mucinous_lung_large_glioblastoma_nonsmall |
Association with transcript: | 140bp_to_AB385133, AJ277882, JF432710_5end |
EntrezGene: | SLC7A11 |
HGNC: | 11059 |
UniProt: | Q9UPY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.38e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-66 | 42 |
defensive cell | 3.24e-57 | 48 |
phagocyte | 3.24e-57 | 48 |
monopoietic cell | 4.17e-44 | 59 |
monocyte | 4.17e-44 | 59 |
monoblast | 4.17e-44 | 59 |
promonocyte | 4.17e-44 | 59 |
macrophage dendritic cell progenitor | 2.04e-42 | 61 |
myeloid lineage restricted progenitor cell | 1.24e-38 | 66 |
granulocyte monocyte progenitor cell | 6.08e-38 | 67 |
myeloid leukocyte | 8.85e-35 | 72 |
myeloid cell | 7.94e-24 | 108 |
common myeloid progenitor | 7.94e-24 | 108 |
nongranular leukocyte | 6.83e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.72e-18 | 120 |
leukocyte | 5.74e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.54e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-13 | 161 |
hematopoietic stem cell | 1.94e-12 | 168 |
hematopoietic cell | 2.08e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.52e-32 | 76 |
bone element | 1.33e-29 | 82 |
skeletal element | 2.77e-26 | 90 |
immune system | 3.47e-25 | 93 |
hematopoietic system | 1.66e-23 | 98 |
blood island | 1.66e-23 | 98 |
skeletal system | 6.99e-23 | 100 |
hemolymphoid system | 1.29e-20 | 108 |
musculoskeletal system | 1.46e-13 | 167 |
lateral plate mesoderm | 3.64e-13 | 203 |