FFCP PHASE1:Hg19::chr4:74864046..74864074,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:74864046..74864074,- to FFCP PHASE1:Hg19::chr4:74864046..74864074,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:74864046..74864074,- | |||
|description=CAGE_peak_at_chr4:74864046..74864074,- | |||
|id=chr4:74864046..74864074,- | |||
|ontology_enrichment_celltype=CL:0000680!2.94e-14!57;CL:0000056!2.94e-14!57;CL:0000355!2.94e-14!57;CL:0000393!7.99e-13!60;CL:0000211!7.99e-13!60;CL:0000187!1.03e-11!54;CL:0000183!5.43e-10!59;CL:0000359!1.17e-08!32;CL:0000192!8.30e-08!42;CL:0000514!8.30e-08!42;CL:0002322!1.00e-07!5;CL:0000055!7.93e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.84e-19;5!CL:0002321;4.00e-15;15!CL:0002595;1.65e-12;5!CL:0000515;1.85e-12;3!CL:0000056;1.89e-09;4!CL:0000680;3.62e-09;7!CL:0002593;1.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.36e-19,5;CL:0002595,1.66e-12,5;CL:0000515,1.77e-09,4;CL:0000680,2.32e-09,58;CL:0000056,2.32e-09,58;CL:0000355,2.32e-09,58;CL:0002593,2.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000515;1.89e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.00e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000486!4.36e-17!82;UBERON:0004290!1.59e-16!70;UBERON:0000914!5.43e-14!83;UBERON:0002329!5.43e-14!83;UBERON:0003077!5.43e-14!83;UBERON:0003059!5.43e-14!83;UBERON:0007282!5.43e-14!83;UBERON:0009618!5.43e-14!83;UBERON:0007285!5.43e-14!83;UBERON:0001134!8.90e-14!61;UBERON:0002036!8.90e-14!61;UBERON:0003082!8.90e-14!61;UBERON:0001049!2.21e-13!57;UBERON:0005068!2.21e-13!57;UBERON:0006241!2.21e-13!57;UBERON:0007135!2.21e-13!57;UBERON:0002385!5.18e-13!63;UBERON:0001015!5.18e-13!63;UBERON:0000383!5.18e-13!63;UBERON:0000483!3.38e-12!309;UBERON:0000119!7.75e-12!312;UBERON:0002616!1.11e-10!59;UBERON:0001017!7.79e-10!82;UBERON:0000025!2.09e-09!194;UBERON:0000955!5.71e-09!69;UBERON:0006238!5.71e-09!69;UBERON:0005743!6.30e-09!86;UBERON:0002780!1.36e-08!41;UBERON:0001890!1.36e-08!41;UBERON:0006240!1.36e-08!41;UBERON:0007023!2.92e-08!115;UBERON:0003080!3.00e-08!42;UBERON:0002020!4.98e-08!34;UBERON:0003528!4.98e-08!34;UBERON:0004111!8.03e-08!241;UBERON:0000073!9.05e-08!94;UBERON:0001016!9.05e-08!94;UBERON:0000922!9.88e-08!612;UBERON:0005256!1.14e-07!143;UBERON:0002791!1.43e-07!33;UBERON:0001893!3.25e-07!34;UBERON:0003076!5.90e-07!15;UBERON:0003057!5.90e-07!15;UBERON:0000475!8.39e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.84e-16;15!UBERON:0000179;4.84e-16;15!UBERON:0000463;4.84e-16;15!UBERON:0003834;1.65e-12;5!UBERON:0001533;1.65e-12;5!UBERON:0003513;6.01e-09;7!UBERON:0002456;1.27e-08;2!UBERON:0001134;5.25e-08;16!UBERON:0002036;5.25e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.11e-16,15;UBERON:0000179,4.11e-16,15;UBERON:0000463,4.11e-16,15;UBERON:0003834,1.66e-12,5;UBERON:0001533,1.66e-12,5;UBERON:0003513,6.03e-09,7;UBERON:0001134,1.45e-08,62;UBERON:0002036,1.45e-08,62;UBERON:0003082,1.45e-08,62;UBERON:0002456,2.08e-08,2;UBERON:0002329,2.76e-08,71;UBERON:0003059,2.76e-08,71;UBERON:0007282,2.76e-08,71;UBERON:0004290,2.76e-08,71;UBERON:0009618,2.76e-08,71;UBERON:0002385,3.32e-08,64;UBERON:0001015,3.32e-08,64;UBERON:0000383,3.32e-08,64;UBERON:0003077,3.99e-08,72;UBERON:0007285,3.99e-08,72;UBERON:0007524,5.69e-08,73;UBERON:0007503,2.93e-07,78;UBERON:0004535,4.55e-07,109;UBERON:0001009,8.92e-07,112 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,1.46379839637152,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,1.24484414159907,0.808264032418128,0.163461903113459,0,0,0,0.312160076830321,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,2.19552671033272,1.45782745153634,2.44007280025989,1.55491582523056,2.77552935963191,0,1.56449532329816,0.643240938192885,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,1.17002132569619,2.97262324577457,0,0,2.41017665312057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,2.535908257668,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,5.06734573336527,1.64381058040307,5.55088986043676,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,2.62156479464514,0.355123450626254,1.23190734020714,0.519254429183621,1.74315567689939,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.580024309752732,1.23238893691716,0.460511024178389,1.37836572484531,0.751941714077915,0.725083469571143,2.38634556765083,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0,1.06461206063404,0.869932992075073,1.11194531462352,0.715624433709956,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.353437207037059,0,1.58510321173008,0,0,4.87426979262569,1.05650146756755,0,0.424216295861138,0,0,1.99031692572366,5.26141062304515,0,0,0.405820753925408,0,0,0.143411352204052,0.196498082026242,0,0,0.844430541190656,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,8.62660935694688,8.41100927856613,5.12682468456746,1.90585420366231,2.05681136543097,5.83625980073446,10.2605973075242,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,3.11664374064136,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64195741961659,1.95879369790977,0,0,0,0,0,0,0,0,0.67401132980677,0.802577647298789,0.234264445725339,0,0,2.42780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,2.3048767678104,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0.681017030557878,0.964518890790115,0.825236619583403,1.66176135211674,0,0,0,0,0,0,0,1.79287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.517131825446202,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,1.72022758707021,1.22021956690538,0.310482014706917,0,0.124980407962107,0,0,0,0,0,1.34329322598187,0,0.554805861502613,0,0,0,0,0,0.777186002913902,1.77426179987561,0,7.19684979461767,0.155262956876259,0,0,0,0,0,0.406870733204662,1.27294061441792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.163565394255844,0.327609848846413,0,0.633936370075881,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,1.25692471932802,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0.255640214277473,0,0.22910686854405,0,0,0,7.06681682029749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0.0679914901909147,0,0,0.743990036333503,0,0,0.504665699340316,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0.853818767021724,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr4:74864046..74864074,- | |||
}} | }} |
Latest revision as of 06:46, 30 July 2015
Short description: | p@chr4:74864046..74864074, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74864046..74864074, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.36e-19 | 5 |
smooth muscle cell of the subclavian artery | 1.66e-12 | 5 |
skeletal muscle myoblast | 1.77e-09 | 4 |
muscle precursor cell | 2.32e-09 | 58 |
myoblast | 2.32e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.32e-09 | 58 |
smooth muscle cell of the internal thoracic artery | 2.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.11e-16 | 15 |
haemolymphatic fluid | 4.11e-16 | 15 |
organism substance | 4.11e-16 | 15 |
thoracic segment blood vessel | 1.66e-12 | 5 |
subclavian artery | 1.66e-12 | 5 |
trunk blood vessel | 6.03e-09 | 7 |
skeletal muscle tissue | 1.45e-08 | 62 |
striated muscle tissue | 1.45e-08 | 62 |
myotome | 1.45e-08 | 62 |
internal thoracic artery | 2.08e-08 | 2 |
somite | 2.76e-08 | 71 |
presomitic mesoderm | 2.76e-08 | 71 |
presumptive segmental plate | 2.76e-08 | 71 |
dermomyotome | 2.76e-08 | 71 |
trunk paraxial mesoderm | 2.76e-08 | 71 |
muscle tissue | 3.32e-08 | 64 |
musculature | 3.32e-08 | 64 |
musculature of body | 3.32e-08 | 64 |
paraxial mesoderm | 3.99e-08 | 72 |
presumptive paraxial mesoderm | 3.99e-08 | 72 |
dense mesenchyme tissue | 5.69e-08 | 73 |
epithelial vesicle | 2.93e-07 | 78 |
cardiovascular system | 4.55e-07 | 109 |
circulatory system | 8.92e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.00e-09 | 2 |