FFCP PHASE1:Hg19::chr5:82834804..82834842,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:82834804..82834842,+ to FFCP PHASE1:Hg19::chr5:82834804..82834842,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:82834804..82834842,+ | |||
|coexpression_cluster_id=C456 | |||
|description=CAGE_peak_at_chr5:82834804..82834842,+ | |||
|id=chr5:82834804..82834842,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.14e-20!42;CL:0000860!8.42e-18!45;CL:0000034!3.98e-10!444;CL:0000048!6.04e-10!430;CL:0000723!1.55e-09!436;CL:0002194!1.86e-09!63;CL:0000576!1.86e-09!63;CL:0000040!1.86e-09!63;CL:0000559!1.86e-09!63;CL:0000055!4.13e-09!180;CL:0002009!1.04e-08!65;CL:0000057!3.00e-07!75;CL:0000839!4.32e-07!70;CL:0000557!8.35e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-22;33!CL:0002057;1.49e-22;33!CL:0000473;3.11e-16;39!CL:0000234;3.11e-16;39!CL:0000576;1.04e-11;48!CL:0002334;7.13e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-21,42;CL:0002057,1.65e-21,42;CL:0000473,1.18e-17,48;CL:0000234,1.18e-17,48;CL:0002194,2.31e-12,59;CL:0000576,2.31e-12,59;CL:0000040,2.31e-12,59;CL:0000559,2.31e-12,59;CL:0002009,1.08e-11,61;CL:0000048,1.86e-11,427;CL:0000723,6.31e-11,433;CL:0000034,1.03e-10,441;CL:0000839,3.31e-10,66;CL:0000557,6.14e-10,67;CL:0000134,9.20e-10,354;CL:0002320,1.36e-09,361;CL:0000766,1.02e-08,72;CL:0000219,7.72e-08,386;CL:0002334,8.95e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;3.59e-16;42 | |||
|ontology_enrichment_disease=DOID:2394!5.40e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.53e-16;14!DOID:193;4.29e-08;29!DOID:120;1.29e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.49e-16,14;DOID:193,3.39e-08,29;DOID:120,9.50e-08,27 | |||
|ontology_enrichment_uberon=UBERON:0002204!8.24e-11!167;UBERON:0000468!3.13e-07!659;UBERON:0002384!5.28e-07!375;UBERON:0004765!9.97e-07!101;UBERON:0001434!9.97e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.68e-08;13!UBERON:0004457;1.20e-07;9!UBERON:0000042;1.20e-07;9!UBERON:0002118;4.16e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.61e-11,315;UBERON:0004120,3.61e-11,315;UBERON:0006603,3.61e-11,315;UBERON:0002384,3.54e-10,371;UBERON:0002371,1.52e-09,76;UBERON:0001474,6.71e-09,82;UBERON:0002204,9.64e-09,167;UBERON:0004765,1.24e-08,90;UBERON:0001434,2.68e-08,100;UBERON:0000992,6.35e-08,13;UBERON:0003081,6.40e-08,203;UBERON:0004797,1.72e-07,7;UBERON:0002118,3.39e-07,5;UBERON:0002390,8.14e-07,98;UBERON:0003061,8.14e-07,98 | |||
|phase1_expression=1.2717486548939,1.71280419112787,0.563817616383885,4.00293193412522,2.68176656656373,3.48935409640147,0,0,1.30592814099919,0,0,0,0,0.247532705920093,0.331397375727916,1.34465029290355,1.80808358407193,0,4.87932798790507,0.123121058076788,0,0,0,0.958120975510189,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,4.41197784434312,3.90619567288533,0,0,0,3.63495596948912,0.755751887377619,0.970336244751265,3.71886459049095,1.6446715520873,2.78735733805593,5.75384784644301,1.7931249457037,0.47296445977717,6.55016793399575,1.93645405075148,5.41705946377367,6.96496656307637,1.36453075028923,0.674170453335254,3.97909060082173,0.962787081228281,4.47535988059329,3.95821560224059,2.19410023383795,1.70489900213078,12.7692064996577,1.13477044938228,1.24564449799115,8.79370328398601,6.77927793946262,2.17188844705117,7.26479403160043,0.736555271975129,0.632924774881769,0.211255286311942,0.637812899895131,0.419317291016752,2.80821577866238,2.25265339262259,1.44653028027372,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,7.31420598941885,0,0.12786256184353,1.44575660953827,0.50133791063589,0.869079113764942,0,1.45990461090791,0.378139268656271,0.665188192387692,1.49319135678314,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.47274756525787,2.15271869829786,1.98613771219828,6.59724227722272,3.19201543978521,0.560677600142307,1.06748995729705,2.71334303258876,0,0.269421344139376,0.490385709340376,0,2.30470369792,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,1.97813543422845,0,0,0,0.250237039743928,0,0.438977620880838,0.30648779579902,0.45071417671979,0.567160915800105,0.89694817844431,2.77624605464138,0.635795703478686,0.300091096084402,0.309157587715317,1.03056216018252,0.37223371266318,1.18143432568886,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0.604512589365842,0.169560592310488,0,0,0,0.975789649036763,0.530119073285941,0.348581828608555,0.725627385107593,1.51392510525377,0.36497735907583,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,3.87448690978212,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,1.00789276919316,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,1.42198887333556,0,0,2.12750493267896,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.699810938274399,0,0,0,0.479249710983165,0,1.42636905040718,0.868687840005475,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.858840442033979,1.50051156317903,0,3.74347550755453,3.21172179834891,1.10391690523754,1.87426263988341,0,0,0,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0.82707210449155,2.37285620900479,1.28073069364133,0,0,0,0.992431231275107,3.99001130548962,2.52594084989766,1.15325234330131,2.04682899626681,3.21707842287215,0,2.31314540703983,2.48586415438378,0.574890092096664,2.59627214591811,0.813472649219715,0.241718899183244,0.802025881213139,0.184161977871793,0.229628896329213,0.728364672026868,0.131124414959424,0,0.385076685522074,0,2.92278449306521,1.26661954671451,0,0,1.94324324491925,0,0.270946437543853,0,0,0,0,0,0,0,0,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0.96670718292122,0.308097234229289,0.460511024178389,0.137836572484531,1.07420244868274,0.580066775656914,0.170453254832202,1.78064071293475,0.661139661443912,0.192190067365106,0.255225424989168,0.10115778085555,1.39453664789186,3.1481234683064,1.3940745403212,0.308033580176089,0,0,0.55597265731176,0.429374660225974,0,0,0.38126038784765,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,2.68084838594413,1.05650146756755,0,0.707027159768564,1.13008116620243,0.551365343546124,0,0,0,0.655894752046633,0,1.54911749049875,0.845086807596724,0,0.0982490410131212,0.7133421029625,0,2.11107635297664,3.29294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.422008249231538,0.333926115068718,0.824019371133798,0,1.39473591775749,0,0,0,0,3.11039587661807,0.0898683511473268,0.179021174675609,0,0.789147245095469,0,2.22273980289274,0,0.278304294485554,0,0,0,0,0,0,0,0,0,1.21537496453305,0,0.361789315876224,1.52581736317083,0.221158519862449,0.295547618953547,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333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| ||
|short_description=p@chr5:82834804..82834842,+ | |||
}} | }} |
Latest revision as of 16:56, 30 July 2015
Short description: | p@chr5:82834804..82834842, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:82834804..82834842, + |
Coexpression cluster: | C456_Fibroblast_Smooth_CD14_Preadipocyte_Lens_mesenchymal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-21 | 42 |
defensive cell | 1.18e-17 | 48 |
phagocyte | 1.18e-17 | 48 |
monopoietic cell | 2.31e-12 | 59 |
monocyte | 2.31e-12 | 59 |
monoblast | 2.31e-12 | 59 |
promonocyte | 2.31e-12 | 59 |
macrophage dendritic cell progenitor | 1.08e-11 | 61 |
multi fate stem cell | 1.86e-11 | 427 |
somatic stem cell | 6.31e-11 | 433 |
stem cell | 1.03e-10 | 441 |
myeloid lineage restricted progenitor cell | 3.31e-10 | 66 |
granulocyte monocyte progenitor cell | 6.14e-10 | 67 |
mesenchymal cell | 9.20e-10 | 354 |
connective tissue cell | 1.36e-09 | 361 |
myeloid leukocyte | 1.02e-08 | 72 |
motile cell | 7.72e-08 | 386 |
preadipocyte | 8.95e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.61e-11 | 315 |
mesoderm-derived structure | 3.61e-11 | 315 |
presumptive mesoderm | 3.61e-11 | 315 |
connective tissue | 3.54e-10 | 371 |
bone marrow | 1.52e-09 | 76 |
bone element | 6.71e-09 | 82 |
musculoskeletal system | 9.64e-09 | 167 |
skeletal element | 1.24e-08 | 90 |
skeletal system | 2.68e-08 | 100 |
female gonad | 6.35e-08 | 13 |
lateral plate mesoderm | 6.40e-08 | 203 |
blood vessel layer | 1.72e-07 | 7 |
right ovary | 3.39e-07 | 5 |
hematopoietic system | 8.14e-07 | 98 |
blood island | 8.14e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.49e-16 | 14 |
reproductive organ cancer | 3.39e-08 | 29 |
female reproductive organ cancer | 9.50e-08 | 27 |