FFCP PHASE1:Hg19::chr6:154677950..154677966,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:154677950..154677966,- to FFCP PHASE1:Hg19::chr6:154677950..154677966,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26034 | |EntrezGene=26034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21204 | |HGNC=21204 | ||
|TSSclassifier=strong | |||
|UniProt=E5RK08 | |UniProt=E5RK08 | ||
|association_with_transcript=-24bp_to_ENST00000520261_5end | |||
|cluster_id=chr6:154677950..154677966,- | |||
|description=CAGE_peak_9_at_IPCEF1_5end | |||
|id=chr6:154677950..154677966,- | |||
|ontology_enrichment_celltype=CL:0000763!4.42e-22!112;CL:0000049!4.42e-22!112;CL:0000037!2.90e-20!172;CL:0000566!2.90e-20!172;CL:0000988!3.57e-18!182;CL:0002032!3.11e-17!165;CL:0000837!3.11e-17!165;CL:0000766!1.27e-13!76;CL:0002009!2.11e-13!65;CL:0002194!8.03e-13!63;CL:0000576!8.03e-13!63;CL:0000040!8.03e-13!63;CL:0000559!8.03e-13!63;CL:0000839!1.03e-12!70;CL:0000738!1.17e-11!140;CL:0000557!1.38e-11!71;CL:0002087!2.58e-10!119;CL:0002031!1.61e-09!124;CL:0002057!1.90e-09!42;CL:0000860!1.77e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.27e-09;3!CL:0000094;1.74e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.05e-17,108;CL:0000049,1.05e-17,108;CL:0000037,3.87e-11,168;CL:0002032,1.54e-10,161;CL:0000837,1.54e-10,161;CL:0000988,2.35e-10,177;CL:0000766,1.50e-09,72;CL:0000775,3.34e-09,3;CL:0002009,7.49e-08,61;CL:0000094,1.76e-07,8;CL:0000557,5.22e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!4.90e-12!31;DOID:1240!1.39e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.76e-17;31!DOID:1240;2.35e-11;39!DOID:225;1.44e-07;1!DOID:2531;3.24e-07;51!DOID:0060083;3.24e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.85e-18,31;DOID:1240,9.20e-14,39;DOID:2531,4.20e-10,51;DOID:0060083,4.20e-10,51;DOID:225,1.36e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.32e-32!115;UBERON:0001049!3.45e-25!57;UBERON:0005068!3.45e-25!57;UBERON:0006241!3.45e-25!57;UBERON:0007135!3.45e-25!57;UBERON:0001893!2.55e-23!34;UBERON:0002020!3.60e-23!34;UBERON:0003528!3.60e-23!34;UBERON:0002791!2.67e-22!33;UBERON:0002780!8.18e-22!41;UBERON:0001890!8.18e-22!41;UBERON:0006240!8.18e-22!41;UBERON:0003080!4.18e-21!42;UBERON:0002616!1.12e-20!59;UBERON:0001869!1.24e-20!32;UBERON:0002390!2.75e-19!102;UBERON:0003061!2.75e-19!102;UBERON:0002619!1.69e-17!22;UBERON:0002193!2.14e-17!112;UBERON:0001017!2.68e-17!82;UBERON:0000955!3.49e-17!69;UBERON:0006238!3.49e-17!69;UBERON:0005743!5.68e-17!86;UBERON:0003075!3.89e-16!86;UBERON:0007284!3.89e-16!86;UBERON:0002346!6.08e-15!90;UBERON:0000956!6.97e-15!25;UBERON:0000203!6.97e-15!25;UBERON:0001950!8.20e-15!20;UBERON:0000073!2.38e-14!94;UBERON:0001016!2.38e-14!94;UBERON:0003056!4.13e-13!61;UBERON:0000178!1.86e-12!15;UBERON:0000179!1.86e-12!15;UBERON:0000463!1.86e-12!15;UBERON:0002371!3.01e-10!80;UBERON:0002308!3.43e-10!9;UBERON:0000125!3.43e-10!9;UBERON:0001474!1.06e-09!86;UBERON:0000200!2.85e-09!6;UBERON:0002420!4.48e-08!9;UBERON:0007245!4.48e-08!9;UBERON:0010009!4.48e-08!9;UBERON:0010011!4.48e-08!9;UBERON:0000454!4.48e-08!9;UBERON:0009663!7.90e-08!7;UBERON:0000153!7.90e-08!129;UBERON:0007811!7.90e-08!129;UBERON:0004765!1.04e-07!101;UBERON:0001434!1.04e-07!101;UBERON:0000033!1.90e-07!123;UBERON:0002405!4.56e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.46e-30;15!UBERON:0000179;3.46e-30;15!UBERON:0000463;3.46e-30;15!UBERON:0002390;7.38e-13;32!UBERON:0002193;1.78e-07;42!UBERON:0002336;4.33e-07;1!UBERON:0011215;4.33e-07;1!UBERON:0001018;4.33e-07;1!UBERON:0002473;4.33e-07;1!UBERON:0005340;4.33e-07;1!UBERON:0003544;4.33e-07;1!UBERON:0005970;4.33e-07;1!UBERON:0002316;4.33e-07;1!UBERON:0001020;4.33e-07;1!UBERON:0002437;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.29e-30,15;UBERON:0000179,5.29e-30,15;UBERON:0000463,5.29e-30,15;UBERON:0002390,1.87e-17,98;UBERON:0003061,1.87e-17,98;UBERON:0002193,1.74e-15,108;UBERON:0002336,4.34e-07,1;UBERON:0011215,4.34e-07,1;UBERON:0001018,4.34e-07,1;UBERON:0002473,4.34e-07,1;UBERON:0005340,4.34e-07,1;UBERON:0003544,4.34e-07,1;UBERON:0005970,4.34e-07,1;UBERON:0002316,4.34e-07,1;UBERON:0001020,4.34e-07,1;UBERON:0002437,4.34e-07,1 | |||
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| ||
|short_description=p9@IPCEF1 | |||
}} | }} |
Latest revision as of 08:21, 16 September 2015
Short description: | p9@IPCEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_IPCEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000520261_5end |
EntrezGene: | IPCEF1 |
HGNC: | 21204 |
UniProt: | E5RK08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.05e-17 | 108 |
common myeloid progenitor | 1.05e-17 | 108 |
hematopoietic stem cell | 3.87e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.54e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-10 | 161 |
hematopoietic cell | 2.35e-10 | 177 |
myeloid leukocyte | 1.50e-09 | 72 |
neutrophil | 3.34e-09 | 3 |
macrophage dendritic cell progenitor | 7.49e-08 | 61 |
granulocyte | 1.76e-07 | 8 |
granulocyte monocyte progenitor cell | 5.22e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
blood | 5.29e-30 | 15 |
haemolymphatic fluid | 5.29e-30 | 15 |
organism substance | 5.29e-30 | 15 |
hematopoietic system | 1.87e-17 | 98 |
blood island | 1.87e-17 | 98 |
hemolymphoid system | 1.74e-15 | 108 |
corpus callosum | 4.34e-07 | 1 |
central nervous system cell part cluster | 4.34e-07 | 1 |
axon tract | 4.34e-07 | 1 |
intercerebral commissure | 4.34e-07 | 1 |
dorsal telencephalic commissure | 4.34e-07 | 1 |
brain white matter | 4.34e-07 | 1 |
brain commissure | 4.34e-07 | 1 |
white matter | 4.34e-07 | 1 |
nervous system commissure | 4.34e-07 | 1 |
cerebral hemisphere white matter | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.85e-18 | 31 |
leukemia | 9.20e-14 | 39 |
hematologic cancer | 4.20e-10 | 51 |
immune system cancer | 4.20e-10 | 51 |
syndrome | 1.36e-07 | 1 |