FFCP PHASE1:Hg19::chr6:31531268..31531281,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:31531268..31531281,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr6:31531268..31531281,- | |||
|id=chr6:31531268..31531281,- | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-67!42;CL:0000860!7.31e-63!45;CL:0000839!5.81e-47!70;CL:0000557!2.94e-46!71;CL:0002194!3.74e-43!63;CL:0000576!3.74e-43!63;CL:0000040!3.74e-43!63;CL:0000559!3.74e-43!63;CL:0000766!5.21e-43!76;CL:0002009!9.74e-42!65;CL:0000763!6.68e-31!112;CL:0000049!6.68e-31!112;CL:0002031!5.09e-25!124;CL:0000738!9.75e-22!140;CL:0002087!2.54e-21!119;CL:0002032!9.23e-20!165;CL:0000837!9.23e-20!165;CL:0000037!8.48e-19!172;CL:0000566!8.48e-19!172;CL:0000988!1.50e-17!182;CL:0002543!1.19e-11!6;CL:0000134!9.01e-08!358;CL:0002320!1.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-58;33!CL:0002057;1.78e-58;33!CL:0000473;2.66e-41;39!CL:0000234;2.66e-41;39!CL:0000576;1.33e-25;48!CL:0000766;6.43e-16;69!CL:0002087;6.74e-11;104!CL:0002543;1.21e-09;6!CL:0000763;1.67e-09;100!CL:0000738;4.99e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.72e-52,42;CL:0002057,8.72e-52,42;CL:0000473,3.65e-45,48;CL:0000234,3.65e-45,48;CL:0002194,6.93e-36,59;CL:0000576,6.93e-36,59;CL:0000040,6.93e-36,59;CL:0000559,6.93e-36,59;CL:0002009,1.09e-34,61;CL:0000839,5.28e-32,66;CL:0000557,1.63e-31,67;CL:0000766,2.88e-29,72;CL:0000763,3.75e-19,108;CL:0000049,3.75e-19,108;CL:0002087,6.53e-18,115;CL:0002031,4.11e-17,120;CL:0000738,6.06e-15,136;CL:0002032,2.09e-12,161;CL:0000837,2.09e-12,161;CL:0000037,7.88e-12,168;CL:0000988,3.74e-11,177;CL:0002543,1.10e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-33;42!CL:0000049;1.80e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-40!80;UBERON:0001474!1.25e-37!86;UBERON:0004765!1.56e-31!101;UBERON:0001434!1.56e-31!101;UBERON:0002390!3.44e-31!102;UBERON:0003061!3.44e-31!102;UBERON:0002193!4.34e-28!112;UBERON:0002405!2.91e-27!115;UBERON:0002204!1.31e-17!167;UBERON:0003081!2.37e-17!216;UBERON:0001638!6.23e-08!9;UBERON:0003920!6.23e-08!9;UBERON:0004582!6.23e-08!9;UBERON:0002384!3.19e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-27,76;UBERON:0001474,1.39e-25,82;UBERON:0004765,3.25e-23,90;UBERON:0002405,1.98e-22,93;UBERON:0002390,3.15e-21,98;UBERON:0003061,3.15e-21,98;UBERON:0001434,8.83e-21,100;UBERON:0002193,3.75e-19,108;UBERON:0003081,4.26e-13,203;UBERON:0002204,6.56e-12,167;UBERON:0000926,7.36e-08,315;UBERON:0004120,7.36e-08,315;UBERON:0006603,7.36e-08,315;UBERON:0001638,9.64e-07,9;UBERON:0003920,9.64e-07,9;UBERON:0004582,9.64e-07,9 | |||
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|short_description=p@chr6:31531268..31531281,- | |||
}} | }} |
Latest revision as of 23:55, 30 July 2015
Short description: | p@chr6:31531268..31531281, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31531268..31531281, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.72e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.72e-52 | 42 |
defensive cell | 3.65e-45 | 48 |
phagocyte | 3.65e-45 | 48 |
monopoietic cell | 6.93e-36 | 59 |
monocyte | 6.93e-36 | 59 |
monoblast | 6.93e-36 | 59 |
promonocyte | 6.93e-36 | 59 |
macrophage dendritic cell progenitor | 1.09e-34 | 61 |
myeloid lineage restricted progenitor cell | 5.28e-32 | 66 |
granulocyte monocyte progenitor cell | 1.63e-31 | 67 |
myeloid leukocyte | 2.88e-29 | 72 |
myeloid cell | 3.75e-19 | 108 |
common myeloid progenitor | 3.75e-19 | 108 |
nongranular leukocyte | 6.53e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.11e-17 | 120 |
leukocyte | 6.06e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-12 | 161 |
hematopoietic stem cell | 7.88e-12 | 168 |
hematopoietic cell | 3.74e-11 | 177 |
vein endothelial cell | 1.10e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-27 | 76 |
bone element | 1.39e-25 | 82 |
skeletal element | 3.25e-23 | 90 |
immune system | 1.98e-22 | 93 |
hematopoietic system | 3.15e-21 | 98 |
blood island | 3.15e-21 | 98 |
skeletal system | 8.83e-21 | 100 |
hemolymphoid system | 3.75e-19 | 108 |
lateral plate mesoderm | 4.26e-13 | 203 |
musculoskeletal system | 6.56e-12 | 167 |
mesoderm | 7.36e-08 | 315 |
mesoderm-derived structure | 7.36e-08 | 315 |
presumptive mesoderm | 7.36e-08 | 315 |
vein | 9.64e-07 | 9 |
venous blood vessel | 9.64e-07 | 9 |
venous system | 9.64e-07 | 9 |