FFCP PHASE1:Hg19::chr6:75796102..75796109,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:75796102..75796109,- to FFCP PHASE1:Hg19::chr6:75796102..75796109,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1303 | |EntrezGene=1303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2188 | |HGNC=2188 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=111bp_to_AK057081_5end | |||
|cluster_id=chr6:75796102..75796109,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_8_at_COL12A1_5end | |||
|id=chr6:75796102..75796109,- | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-16!180;CL:0000057!2.88e-16!75;CL:0002620!2.43e-10!23;CL:0000499!3.96e-10!27;CL:0002334!1.84e-08!12;CL:0000048!1.63e-07!430;CL:0000723!2.29e-07!436;CL:0000034!4.49e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.63e-25;23!CL:0002334;1.22e-18;12!CL:0000153;1.30e-17;9!CL:0000447;1.30e-17;9!CL:0002580;3.03e-15;3!CL:0002615;5.06e-15;3!CL:0002579;1.11e-14;3!CL:0000135;2.11e-14;3!CL:0000388;2.11e-14;3!CL:0000136;8.01e-13;13!CL:0000138;1.59e-12;6!CL:0000499;1.45e-11;28!CL:0002617;9.77e-11;2!CL:0000327;2.52e-10;15!CL:0000057;1.95e-08;73!CL:0002537;3.12e-08;5!CL:0000214;9.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.66e-25,23;CL:0000057,9.45e-24,76;CL:0002334,1.20e-18,12;CL:0000153,1.26e-17,9;CL:0000447,1.26e-17,9;CL:0002580,3.25e-15,3;CL:0002615,4.96e-15,3;CL:0002579,9.94e-15,3;CL:0000135,2.72e-14,3;CL:0000388,2.72e-14,3;CL:0000134,2.71e-13,354;CL:0002320,7.15e-13,361;CL:0000058,1.91e-12,6;CL:0000138,1.91e-12,6;CL:0000499,1.54e-11,28;CL:0000219,2.17e-11,386;CL:0000136,5.03e-11,15;CL:0002617,1.00e-10,2;CL:0000048,2.26e-10,427;CL:0000327,2.48e-10,15;CL:0000723,4.13e-10,433;CL:0000034,9.03e-10,441;CL:0002537,3.88e-08,5;CL:0000214,7.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.87e-07!5;DOID:450!2.87e-07!5;DOID:66!2.87e-07!5;DOID:423!2.87e-07!5;DOID:0080000!2.87e-07!5;DOID:11722!2.87e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.24e-14;5!DOID:450;1.24e-14;5!DOID:66;1.24e-14;5!DOID:423;1.24e-14;5!DOID:0080000;1.24e-14;5!DOID:11722;1.24e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.38e-14,5;DOID:450,1.38e-14,5;DOID:66,1.38e-14,5;DOID:423,1.38e-14,5;DOID:0080000,1.38e-14,5;DOID:11722,1.38e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.42e-10!95;UBERON:0003688!1.81e-09!6;UBERON:0002358!1.81e-09!6;UBERON:0003684!1.81e-09!6;UBERON:0001178!1.81e-09!6;UBERON:0002199!3.37e-08!45;UBERON:0002416!3.37e-08!45;UBERON:0002097!3.80e-08!40;UBERON:0000475!6.90e-08!365;UBERON:0000486!1.50e-07!82;UBERON:0001134!3.37e-07!61;UBERON:0002036!3.37e-07!61;UBERON:0003082!3.37e-07!61;UBERON:0004457!3.69e-07!12;UBERON:0000042!3.69e-07!12;UBERON:0002385!9.46e-07!63;UBERON:0001015!9.46e-07!63;UBERON:0000383!9.46e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.89e-32;9!UBERON:0000042;8.89e-32;9!UBERON:0003688;6.30e-28;6!UBERON:0002358;6.30e-28;6!UBERON:0003684;6.30e-28;6!UBERON:0001178;6.30e-28;6!UBERON:0001443;4.95e-15;11!UBERON:0007846;2.11e-14;3!UBERON:0000043;2.11e-14;3!UBERON:0007845;2.11e-14;3!UBERON:0000310;5.80e-12;10!UBERON:0002097;1.97e-11;41!UBERON:0005406;8.27e-11;2!UBERON:0002199;4.20e-10;46!UBERON:0002416;4.20e-10;46!UBERON:0003102;6.18e-07;50!UBERON:0006915;9.35e-07;3!UBERON:0007616;9.35e-07;3!UBERON:0002217;9.35e-07;3!UBERON:0002018;9.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.50e-28,6;UBERON:0002358,5.50e-28,6;UBERON:0003684,5.50e-28,6;UBERON:0001178,5.50e-28,6;UBERON:0004457,1.21e-23,12;UBERON:0000042,1.21e-23,12;UBERON:0002097,2.00e-15,41;UBERON:0001443,4.55e-15,11;UBERON:0007846,2.72e-14,3;UBERON:0000043,2.72e-14,3;UBERON:0007845,2.72e-14,3;UBERON:0002199,1.89e-13,46;UBERON:0002416,1.89e-13,46;UBERON:0002384,2.68e-12,371;UBERON:0000310,6.08e-12,10;UBERON:0005406,8.28e-11,2;UBERON:0004923,9.54e-09,66;UBERON:0006915,7.60e-07,3;UBERON:0007616,7.60e-07,3;UBERON:0002217,7.60e-07,3;UBERON:0002018,7.60e-07,3 | |||
|phase1_expression=5.63202975738726,9.63452357509424,4.36958652697511,8.00586386825043,5.81049422755474,8.72338524100369,0,0,0,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,3.2529523714611,2.00535164254356,5.21447468258965,0,3.40644409211845,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0.919463387397059,0.150238058906597,0,2.33206526395521,5.97960688691989,2.96704661623387,0.300091096084402,1.03052529238439,5.92573242104947,2.60563598864226,1.85653965465393,1.36411807225678,1.51460264546469,1.38074847963449,1.2931684545505,4.61512470271599,0.705264687593482,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.904902010304444,0,0,1.06375246633948,1.04007436911366,0,0,0,0.285955987316295,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0,0,0.415941723061614,0,0.946214490203608,0.585707074963566,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,5.45837177201309,10.5888761568763,6.73584226639377,2.81906128362542,4.09365799253363,7.88184213603677,7.42090332224955,0.308419387605311,0.177561725313127,0,0,0,0,0.200506470303285,0,0.114814448164607,0.910455840033585,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0.214840489736547,0.290033387828457,0.170453254832202,0.267096106940212,0,0.192190067365106,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,1.28381696410176,0.318203247925937,0,0.899362287916574,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0.243713489631284,0,0.818999468447914,0.707027159768564,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,1.68886108238131,2.63435914367922,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,1.48482340416319,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,1.36730467016401,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.934853239388898,0,0,2.76724691927833,0.889811221596536,0,0,0,0.147855149989634,0.159296767163702,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0,0,0,0.322231671127465,0,0.796191777397232,0,0.686791410365586,0,0,0,0.428883182749851,0,0,0,0,0.358177682162975,0.308801447160972,0.438568099157414,0.353378291891762,0,0.168942440653073,0,0,0,0,0,0,0,0.982829546539238,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,3.6749457282384,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09194519983426,2.31087814315709,3.02838593486652,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p8@COL12A1 | |||
}} | }} |
Latest revision as of 19:26, 19 September 2015
Short description: | p8@COL12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_COL12A1_5end |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | 111bp_to_AK057081_5end |
EntrezGene: | COL12A1 |
HGNC: | 2188 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.66e-25 | 23 |
fibroblast | 9.45e-24 | 76 |
preadipocyte | 1.20e-18 | 12 |
GAG secreting cell | 1.26e-17 | 9 |
carbohydrate secreting cell | 1.26e-17 | 9 |
preadipocyte of the breast | 3.25e-15 | 3 |
adipocyte of omentum tissue | 4.96e-15 | 3 |
omentum preadipocyte | 9.94e-15 | 3 |
fibrocyte | 2.72e-14 | 3 |
tendon cell | 2.72e-14 | 3 |
mesenchymal cell | 2.71e-13 | 354 |
connective tissue cell | 7.15e-13 | 361 |
chondroblast | 1.91e-12 | 6 |
chondrocyte | 1.91e-12 | 6 |
stromal cell | 1.54e-11 | 28 |
motile cell | 2.17e-11 | 386 |
fat cell | 5.03e-11 | 15 |
adipocyte of breast | 1.00e-10 | 2 |
multi fate stem cell | 2.26e-10 | 427 |
extracellular matrix secreting cell | 2.48e-10 | 15 |
somatic stem cell | 4.13e-10 | 433 |
stem cell | 9.03e-10 | 441 |
amnion mesenchymal stem cell | 3.88e-08 | 5 |
synovial cell | 7.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.50e-28 | 6 |
peritoneum | 5.50e-28 | 6 |
abdominal cavity | 5.50e-28 | 6 |
visceral peritoneum | 5.50e-28 | 6 |
cavity lining | 1.21e-23 | 12 |
serous membrane | 1.21e-23 | 12 |
skin of body | 2.00e-15 | 41 |
chest | 4.55e-15 | 11 |
dense regular connective tissue | 2.72e-14 | 3 |
tendon | 2.72e-14 | 3 |
regular connective tissue | 2.72e-14 | 3 |
integument | 1.89e-13 | 46 |
integumental system | 1.89e-13 | 46 |
connective tissue | 2.68e-12 | 371 |
breast | 6.08e-12 | 10 |
perirenal fat | 8.28e-11 | 2 |
organ component layer | 9.54e-09 | 66 |
stratified squamous epithelium | 7.60e-07 | 3 |
layer of synovial tissue | 7.60e-07 | 3 |
synovial joint | 7.60e-07 | 3 |
synovial membrane of synovial joint | 7.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.38e-14 | 5 |
myotonic disease | 1.38e-14 | 5 |
muscle tissue disease | 1.38e-14 | 5 |
myopathy | 1.38e-14 | 5 |
muscular disease | 1.38e-14 | 5 |
myotonic dystrophy | 1.38e-14 | 5 |