FFCP PHASE1:Hg19::chr7:100780601..100780612,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100780601..100780612,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr7:100780601..100780612,+ | |||
|id=chr7:100780601..100780612,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.30e-67!42;CL:0000860!8.72e-62!45;CL:0000766!1.16e-50!76;CL:0000557!1.32e-48!71;CL:0000839!2.07e-46!70;CL:0002009!6.28e-45!65;CL:0002194!1.46e-43!63;CL:0000576!1.46e-43!63;CL:0000040!1.46e-43!63;CL:0000559!1.46e-43!63;CL:0000763!6.67e-35!112;CL:0000049!6.67e-35!112;CL:0000738!5.96e-34!140;CL:0002031!4.83e-30!124;CL:0002087!4.43e-28!119;CL:0000037!8.88e-27!172;CL:0000566!8.88e-27!172;CL:0002032!1.76e-25!165;CL:0000837!1.76e-25!165;CL:0000988!1.19e-24!182;CL:0000134!5.64e-16!358;CL:0002320!2.12e-15!365;CL:0000219!3.94e-14!390;CL:0000048!1.16e-11!430;CL:0000723!2.63e-11!436;CL:0000034!7.55e-11!444;CL:0000767!2.05e-10!3;CL:0000623!9.15e-09!3;CL:0000825!9.15e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-55;33!CL:0002057;1.94e-55;33!CL:0000473;2.10e-41;39!CL:0000234;2.10e-41;39!CL:0000576;4.55e-31;48!CL:0000766;1.88e-21;69!CL:0000767;4.42e-14;3!CL:0000763;1.21e-13;100!CL:0002087;3.54e-10;104!CL:0000738;2.59e-08;136!CL:0002393;2.69e-07;6!CL:0002397;2.69e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.12e-62,42;CL:0002057,2.12e-62,42;CL:0000473,2.65e-54,48;CL:0000234,2.65e-54,48;CL:0000766,3.42e-49,72;CL:0000557,2.16e-47,67;CL:0002009,1.05e-46,61;CL:0000839,5.07e-43,66;CL:0002194,5.86e-43,59;CL:0000576,5.86e-43,59;CL:0000040,5.86e-43,59;CL:0000559,5.86e-43,59;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0000738,9.17e-28,136;CL:0002031,1.79e-25,120;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0002087,5.34e-21,115;CL:0000988,1.00e-20,177;CL:0000767,3.88e-14,3;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;6.82e-44;42!CL:0000049;1.20e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.75e-42!80;UBERON:0001474!1.95e-38!86;UBERON:0002390!7.61e-35!102;UBERON:0003061!7.61e-35!102;UBERON:0002193!9.32e-33!112;UBERON:0004765!2.83e-31!101;UBERON:0001434!2.83e-31!101;UBERON:0002405!4.85e-28!115;UBERON:0002204!3.72e-16!167;UBERON:0002384!1.29e-14!375;UBERON:0003081!1.13e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.50e-41,76;UBERON:0001474,2.33e-38,82;UBERON:0004765,9.35e-35,90;UBERON:0002405,1.46e-33,93;UBERON:0002390,9.85e-32,98;UBERON:0003061,9.85e-32,98;UBERON:0001434,4.73e-31,100;UBERON:0002193,1.41e-28,108;UBERON:0002204,1.42e-17,167;UBERON:0003081,5.70e-14,203;UBERON:0002384,2.34e-08,371;UBERON:0000926,5.74e-08,315;UBERON:0004120,5.74e-08,315;UBERON:0006603,5.74e-08,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,0.767658796194425,3.8704030829019,0,0,0,0,0,0,2.21598163412751,1.80490002723128,0.651032612147555,0,0,0,1.30858414901608,0.377875943688809,0.242584061187816,2.09186133215116,0.411167888021826,1.85823822537062,0.863077176966451,1.7931249457037,0.709446689665756,1.37898272294647,3.22742341791913,1.35426486594342,0.941211697713023,1.09162460023138,0.449446968890169,3.97909060082173,0.320929027076094,1.27867425159808,0.329851300186716,0.398927315243264,0.426224750532694,1.7412554317715,0.56738522469114,0,1.7587406567972,0,0.434377689410233,2.42159801053347,2.20966581592539,1.26584954976354,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:100780601..100780612,+ | |||
}} | }} |
Latest revision as of 04:16, 31 July 2015
Short description: | p@chr7:100780601..100780612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100780601..100780612, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.12e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-62 | 42 |
defensive cell | 2.65e-54 | 48 |
phagocyte | 2.65e-54 | 48 |
myeloid leukocyte | 3.42e-49 | 72 |
granulocyte monocyte progenitor cell | 2.16e-47 | 67 |
macrophage dendritic cell progenitor | 1.05e-46 | 61 |
myeloid lineage restricted progenitor cell | 5.07e-43 | 66 |
monopoietic cell | 5.86e-43 | 59 |
monocyte | 5.86e-43 | 59 |
monoblast | 5.86e-43 | 59 |
promonocyte | 5.86e-43 | 59 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
leukocyte | 9.17e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 1.79e-25 | 120 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic stem cell | 5.58e-22 | 168 |
nongranular leukocyte | 5.34e-21 | 115 |
hematopoietic cell | 1.00e-20 | 177 |
basophil | 3.88e-14 | 3 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.50e-41 | 76 |
bone element | 2.33e-38 | 82 |
skeletal element | 9.35e-35 | 90 |
immune system | 1.46e-33 | 93 |
hematopoietic system | 9.85e-32 | 98 |
blood island | 9.85e-32 | 98 |
skeletal system | 4.73e-31 | 100 |
hemolymphoid system | 1.41e-28 | 108 |
musculoskeletal system | 1.42e-17 | 167 |
lateral plate mesoderm | 5.70e-14 | 203 |
connective tissue | 2.34e-08 | 371 |
mesoderm | 5.74e-08 | 315 |
mesoderm-derived structure | 5.74e-08 | 315 |
presumptive mesoderm | 5.74e-08 | 315 |