FFCP PHASE1:Hg19::chr7:48672353..48672374,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:48672353..48672374,+ to FFCP PHASE1:Hg19::chr7:48672353..48672374,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:48672353..48672374,+ | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_at_chr7:48672353..48672374,+ | |||
|id=chr7:48672353..48672374,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.93e-19!42;CL:0000860!2.71e-18!45;CL:0000839!8.08e-17!70;CL:0000557!3.19e-16!71;CL:0002009!7.41e-16!65;CL:0000766!2.42e-15!76;CL:0002194!9.16e-15!63;CL:0000576!9.16e-15!63;CL:0000040!9.16e-15!63;CL:0000559!9.16e-15!63;CL:0000763!3.08e-14!112;CL:0000049!3.08e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-29;33!CL:0002057;3.80e-29;33!CL:0000473;9.62e-24;39!CL:0000234;9.62e-24;39!CL:0000576;4.75e-16;48!CL:0000766;6.84e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-30,42;CL:0002057,1.06e-30,42;CL:0000473,1.27e-30,48;CL:0000234,1.27e-30,48;CL:0000839,3.95e-26,66;CL:0000557,1.07e-25,67;CL:0000766,1.87e-24,72;CL:0002009,5.09e-24,61;CL:0002194,3.01e-22,59;CL:0000576,3.01e-22,59;CL:0000040,3.01e-22,59;CL:0000559,3.01e-22,59;CL:0000763,2.65e-21,108;CL:0000049,2.65e-21,108;CL:0000738,5.25e-10,136;CL:0002031,6.71e-10,120;CL:0002032,3.96e-09,161;CL:0000837,3.96e-09,161;CL:0000037,2.26e-08,168;CL:0000988,4.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.44e-15!80;UBERON:0001474!6.41e-14!86;UBERON:0004765!1.22e-11!101;UBERON:0001434!1.22e-11!101;UBERON:0002390!5.00e-10!102;UBERON:0003061!5.00e-10!102;UBERON:0002193!4.47e-09!112;UBERON:0002405!6.13e-09!115;UBERON:0002204!1.45e-08!167;UBERON:0003081!8.61e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-23,76;UBERON:0001474,2.71e-20,82;UBERON:0004765,1.84e-18,90;UBERON:0002405,7.38e-18,93;UBERON:0001434,3.70e-16,100;UBERON:0002390,1.23e-15,98;UBERON:0003061,1.23e-15,98;UBERON:0002193,2.58e-14,108;UBERON:0002204,1.48e-13,167;UBERON:0003081,1.74e-10,203 | |||
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| ||
|short_description=p@chr7:48672353..48672374,+ | |||
}} | }} |
Latest revision as of 10:36, 31 July 2015
Short description: | p@chr7:48672353..48672374, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:48672353..48672374, + |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-30 | 42 |
defensive cell | 1.27e-30 | 48 |
phagocyte | 1.27e-30 | 48 |
myeloid lineage restricted progenitor cell | 3.95e-26 | 66 |
granulocyte monocyte progenitor cell | 1.07e-25 | 67 |
myeloid leukocyte | 1.87e-24 | 72 |
macrophage dendritic cell progenitor | 5.09e-24 | 61 |
monopoietic cell | 3.01e-22 | 59 |
monocyte | 3.01e-22 | 59 |
monoblast | 3.01e-22 | 59 |
promonocyte | 3.01e-22 | 59 |
myeloid cell | 2.65e-21 | 108 |
common myeloid progenitor | 2.65e-21 | 108 |
leukocyte | 5.25e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.71e-10 | 120 |
hematopoietic oligopotent progenitor cell | 3.96e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.96e-09 | 161 |
hematopoietic stem cell | 2.26e-08 | 168 |
hematopoietic cell | 4.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-23 | 76 |
bone element | 2.71e-20 | 82 |
skeletal element | 1.84e-18 | 90 |
immune system | 7.38e-18 | 93 |
skeletal system | 3.70e-16 | 100 |
hematopoietic system | 1.23e-15 | 98 |
blood island | 1.23e-15 | 98 |
hemolymphoid system | 2.58e-14 | 108 |
musculoskeletal system | 1.48e-13 | 167 |
lateral plate mesoderm | 1.74e-10 | 203 |