FFCP PHASE1:Hg19::chr7:5938351..5938379,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:5938351..5938379,+ to FFCP PHASE1:Hg19::chr7:5938351..5938379,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221960,51622 | |EntrezGene=221960,51622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21691,21717 | |HGNC=21691,21717 | ||
|TSSclassifier=strong | |||
|UniProt=P86791 | |UniProt=P86791 | ||
|association_with_transcript=0bp_to_ENST00000325974,ENST00000461592_5end | |||
|cluster_id=chr7:5938351..5938379,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_2_at_CCZ1B_5end,CAGE_peak_2_at_CCZ1_5end | |||
|id=chr7:5938351..5938379,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.25e-35!42;CL:0000860!3.83e-32!45;CL:0000557!6.25e-25!71;CL:0000839!6.31e-25!70;CL:0002009!8.76e-23!65;CL:0000766!2.81e-22!76;CL:0002194!8.59e-22!63;CL:0000576!8.59e-22!63;CL:0000040!8.59e-22!63;CL:0000559!8.59e-22!63;CL:0000763!7.10e-20!112;CL:0000049!7.10e-20!112;CL:0000738!8.08e-18!140;CL:0002031!3.09e-17!124;CL:0000037!2.63e-15!172;CL:0000566!2.63e-15!172;CL:0002032!3.85e-15!165;CL:0000837!3.85e-15!165;CL:0002087!1.95e-13!119;CL:0000988!3.35e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.46e-38;33!CL:0002057;4.46e-38;33!CL:0000473;1.69e-30;39!CL:0000234;1.69e-30;39!CL:0000576;2.71e-23;48!CL:0000766;1.94e-16;69!CL:0000763;1.28e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.33e-45,42;CL:0002057,6.33e-45,42;CL:0000473,3.19e-44,48;CL:0000234,3.19e-44,48;CL:0000839,5.09e-35,66;CL:0000557,1.27e-33,67;CL:0002194,2.97e-32,59;CL:0000576,2.97e-32,59;CL:0000040,2.97e-32,59;CL:0000559,2.97e-32,59;CL:0002009,3.69e-32,61;CL:0000766,1.18e-31,72;CL:0000763,1.78e-26,108;CL:0000049,1.78e-26,108;CL:0000738,3.70e-19,136;CL:0002031,1.55e-18,120;CL:0002032,1.47e-16,161;CL:0000837,1.47e-16,161;CL:0000037,2.18e-16,168;CL:0002087,7.58e-15,115;CL:0000988,1.33e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.58e-32;42!CL:0000049;1.79e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.46e-21!80;UBERON:0001474!1.74e-18!86;UBERON:0004765!7.72e-16!101;UBERON:0001434!7.72e-16!101;UBERON:0002390!1.55e-15!102;UBERON:0003061!1.55e-15!102;UBERON:0002193!3.87e-14!112;UBERON:0002405!7.80e-14!115;UBERON:0002204!3.55e-09!167;UBERON:0001737!1.25e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.81e-10;9!UBERON:0001557;2.81e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.14e-29,76;UBERON:0001474,8.12e-26,82;UBERON:0004765,6.45e-25,90;UBERON:0002405,3.55e-23,93;UBERON:0001434,8.16e-21,100;UBERON:0002390,4.36e-19,98;UBERON:0003061,4.36e-19,98;UBERON:0002193,8.89e-18,108;UBERON:0002204,1.49e-12,167;UBERON:0001737,1.90e-10,9;UBERON:0003081,7.75e-07,203 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,5.3786011716142,2.41077811209591,1.46062018077475,2.92759679274304,0.123121058076788,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,2.94150634300544,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,4.79814187972564,6.42389104270976,6.30718559088322,5.34586784883075,2.87817521615278,7.43295290148249,7.76769459269806,6.14785695669842,12.0605937243178,3.10271112662957,8.39130088658974,5.41705946377367,3.01187743268168,4.91231070104122,7.19115150224271,5.50951006267625,8.02322567690234,7.67204550958849,4.94776950280074,5.78444607102732,10.6556187633174,6.67481248845743,13.0498601678962,12.4564449799115,3.51748131359441,4.17186334736161,8.90474263290978,4.23779651843358,12.8897172595648,10.4432587855492,5.49263744411049,5.10250319916104,5.66078342872615,2.80821577866238,4.8056605709282,6.26829788118613,3.13514018115373,7.35991705636633,9.31587184199633,0,2.18455444504853,0.889509253863555,0,1.20118796110804,0,0,1.90810750907073,0,0,0,0,1.68152568894461,1.84368859342554,0,0,0,5.68434084328306,0.977766799900771,0.473447805734733,1.94826728407911,2.45103005147382,3.53527088969805,2.43687284041983,4.60366568400527,2.5618263945135,2.86130564631732,2.79544437826249,2.21080014228679,4.05724320029073,3.55887751588945,4.0131124213457,4.18142095219907,3.39928028092699,0.766440987203842,1.03088233644789,4.30133476433155,0.95569624297229,0.651083453856419,1.90090408889675,1.6563263098555,1.02389288923535,0,0.947109008176067,0.821127996921047,0,0,0,0,0,3.45228916977532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35021065793013,0,0,0,5.17267381820198,0,0,0,0,0,0,0,0,0,0,3.02785021050754,4.01475094983413,0,0.643240938192885,0,0,0,2.83936320095625,3.37169380156203,4.57920956778616,2.53676137284506,4.57546832594053,3.55905928666645,3.23595139584395,4.51309369788296,6.54070166808864,0,0,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0,0,0,0,3.13012093432707,4.22671299248958,0,3.24089858803628,3.23432058798817,0,0,0,0,0,0,7.22323151255096,7.08875486211932,0,0,0,0,2.81754988842323,1.65862492432618,2.16179930125442,0.75745460055828,3.36538839748496,0,0,0,0,3.00343057843917,8.00314011365619,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,5.02257091432126,6.32501818449095,0,0,14.2636905040718,0,0,0,0,0,0,0,0,0,0,0,5.10351001322531,0,0,0,0,0,0,3.53550464602372,2.14114786556594,2.68094105557689,4.09994952474496,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,3.6830873589135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13927654608617,3.13722541229881,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,4.01551786171344,4.02821068153797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0.957526850661834,0,3.24621940274555,0,0,0,0,3.04725200042886,0,0,0,0,0,0,0,0,0,0,3.2454681417118,0,0,0,0,0,0,0,2.62618933211459,2.07875276582847,0,4.97073823883149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.120596438625408,4.5774520895125,0,0,0,0.10893846351899,0,0,0,0,0,0,0.638002319463839,4.03029410968194,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,9.00630433064684,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.0984274815147488,0,4.77137813885582,0,4.82259445395058,4.53880140770872,5.81616473240859,1.349843349309,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,2.58565912723101,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.919036730290385,0.655745261419609,0,2.65820453990096,3.29470915235301,0,7.45431954397093,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,2.66943366478961,0,0,0,0,0,5.39763734596325,0,4.56176828624941,0,3.1304703708704,0,7.9969094555447,0,0,0,5.10437135866343,3.18476710958893,0,4.46414416737631,4.04099386519103,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,5.0663680298241,4.51740457065435,7.36044274151299,0,0,0,0,0,0,0,0.184105950251841,1.258915569475,1.24415452006595,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,2.40171224485641,0,0,0,9.91876034279095,0,0,0,0,0.161475645631851,7.13847101295772,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,6.24862478891078,0.206686796501184,0,0,0,0,0,0,11.249738553444,0,6.67662164660295,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,3.41227024230752,6.68877257284203,0,0,0,6.47428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72986087518396,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1092655719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| ||
|short_description=p2@CCZ1B,p2@CCZ1 | |||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p2@CCZ1B, p2@CCZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCZ1B_5end, CAGE_peak_2_at_CCZ1_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000325974, ENST00000461592_5end |
EntrezGene: | 221960,51622 |
HGNC: | 21717&submit=Submit 21691, 21717 |
UniProt: | P86791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.33e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.33e-45 | 42 |
defensive cell | 3.19e-44 | 48 |
phagocyte | 3.19e-44 | 48 |
myeloid lineage restricted progenitor cell | 5.09e-35 | 66 |
granulocyte monocyte progenitor cell | 1.27e-33 | 67 |
monopoietic cell | 2.97e-32 | 59 |
monocyte | 2.97e-32 | 59 |
monoblast | 2.97e-32 | 59 |
promonocyte | 2.97e-32 | 59 |
macrophage dendritic cell progenitor | 3.69e-32 | 61 |
myeloid leukocyte | 1.18e-31 | 72 |
myeloid cell | 1.78e-26 | 108 |
common myeloid progenitor | 1.78e-26 | 108 |
leukocyte | 3.70e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.55e-18 | 120 |
hematopoietic oligopotent progenitor cell | 1.47e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-16 | 161 |
hematopoietic stem cell | 2.18e-16 | 168 |
nongranular leukocyte | 7.58e-15 | 115 |
hematopoietic cell | 1.33e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.14e-29 | 76 |
bone element | 8.12e-26 | 82 |
skeletal element | 6.45e-25 | 90 |
immune system | 3.55e-23 | 93 |
skeletal system | 8.16e-21 | 100 |
hematopoietic system | 4.36e-19 | 98 |
blood island | 4.36e-19 | 98 |
hemolymphoid system | 8.89e-18 | 108 |
musculoskeletal system | 1.49e-12 | 167 |
larynx | 1.90e-10 | 9 |
lateral plate mesoderm | 7.75e-07 | 203 |