FFCP PHASE1:Hg19::chr7:7575494..7575509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=340267 | |EntrezGene=340267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22442 | |HGNC=22442 | ||
|TSSclassifier=strong | |||
|UniProt=Q2UY09 | |UniProt=Q2UY09 | ||
|association_with_transcript=-10bp_to_ENST00000399429_5end | |||
|cluster_id=chr7:7575494..7575509,- | |||
|coexpression_cluster_id=C4698 | |||
|description=CAGE_peak_1_at_COL28A1_5end | |||
|id=chr7:7575494..7575509,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.54e-11;3!UBERON:0003057;1.54e-11;3!UBERON:0006603;2.84e-09;65!UBERON:0005062;3.72e-09;4!UBERON:0007284;3.72e-09;4!UBERON:0007297;5.21e-08;2!UBERON:0006965;1.22e-07;2!UBERON:0003104;3.33e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-60!115;UBERON:0002298!8.55e-13!8;UBERON:0003076!1.12e-10!15;UBERON:0003057!1.12e-10!15;UBERON:0003103!8.22e-10!69;UBERON:0003978!8.36e-09!3;UBERON:0009751!8.36e-09!3;UBERON:0000946!8.36e-09!3;UBERON:0002523!8.36e-09!3;UBERON:0005983!8.36e-09!3;UBERON:0002165!8.36e-09!3;UBERON:0002062!8.36e-09!3;UBERON:0007280!8.36e-09!3;UBERON:0002240!2.08e-08!3;UBERON:0004151!2.41e-08!3;UBERON:0006947!2.47e-08!3;UBERON:0004054!2.47e-08!3;UBERON:0000062!3.18e-08!511;UBERON:0003075!8.00e-08!86;UBERON:0007284!8.00e-08!86;UBERON:0003135!2.42e-07!11;UBERON:0001896!2.54e-07!3;UBERON:0005290!2.54e-07!3;UBERON:0010096!2.54e-07!3;UBERON:0002346!3.04e-07!90;UBERON:0001049!6.64e-07!57;UBERON:0005068!6.64e-07!57;UBERON:0006241!6.64e-07!57;UBERON:0007135!6.64e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.40e-12;3!UBERON:0000946;4.40e-12;3!UBERON:0004921;1.51e-11;33!UBERON:0002240;1.54e-11;3!UBERON:0005174;1.54e-11;3!UBERON:0001137;1.54e-11;3!UBERON:0000160;1.57e-11;17!UBERON:0006947;1.75e-11;3!UBERON:0004054;1.75e-11;3!UBERON:0004151;2.24e-11;3!UBERON:0007023;1.46e-10;114!UBERON:0005409;1.01e-08;22!UBERON:0005904;1.03e-08;4!UBERON:0002133;1.11e-08;2!UBERON:0002081;1.36e-08;2!UBERON:0000059;3.01e-08;11!UBERON:0003127;3.35e-08;2!UBERON:0000922;3.60e-08;49!UBERON:0001829;5.21e-08;2!UBERON:0000341;7.78e-08;2!UBERON:0005090;9.09e-08;2!UBERON:0001630;9.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-41,114;UBERON:0003103,3.00e-12,68;UBERON:0003978,3.80e-12,3;UBERON:0009751,3.80e-12,3;UBERON:0000946,3.80e-12,3;UBERON:0002523,3.80e-12,3;UBERON:0005983,3.80e-12,3;UBERON:0002165,3.80e-12,3;UBERON:0002062,3.80e-12,3;UBERON:0007280,3.80e-12,3;UBERON:0000160,1.37e-11,17;UBERON:0002240,1.44e-11,3;UBERON:0005174,1.44e-11,3;UBERON:0001137,1.44e-11,3;UBERON:0004151,1.78e-11,3;UBERON:0006947,1.84e-11,3;UBERON:0004054,1.84e-11,3;UBERON:0002133,1.07e-08,2;UBERON:0005904,1.07e-08,4;UBERON:0002081,1.33e-08,2;UBERON:0010227,1.33e-08,2;UBERON:0000059,2.93e-08,11;UBERON:0003127,3.41e-08,2;UBERON:0001829,5.59e-08,2;UBERON:0000341,7.92e-08,2;UBERON:0005090,9.10e-08,2;UBERON:0001630,9.10e-08,2;UBERON:0005409,1.35e-07,25;UBERON:0004921,6.35e-07,118;UBERON:0002108,9.57e-07,4 | |||
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| ||
|short_description=p1@COL28A1 | |||
}} | }} |
Latest revision as of 13:02, 19 September 2015
Short description: | p1@COL28A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL28A1_5end |
Coexpression cluster: | C4698_spinal_heart_esophagus_trachea_duodenum_substantia_penis |
Association with transcript: | -10bp_to_ENST00000399429_5end |
EntrezGene: | COL28A1 |
HGNC: | 22442 |
UniProt: | Q2UY09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-41 | 114 |
compound organ | 3.00e-12 | 68 |
valve | 3.80e-12 | 3 |
cardiac mesenchyme | 3.80e-12 | 3 |
cardial valve | 3.80e-12 | 3 |
tunica intima | 3.80e-12 | 3 |
heart layer | 3.80e-12 | 3 |
endocardium | 3.80e-12 | 3 |
endocardial cushion | 3.80e-12 | 3 |
presumptive endocardium | 3.80e-12 | 3 |
intestine | 1.37e-11 | 17 |
spinal cord | 1.44e-11 | 3 |
dorsal region element | 1.44e-11 | 3 |
dorsum | 1.44e-11 | 3 |
cardiac chamber | 1.78e-11 | 3 |
male genital duct | 1.84e-11 | 3 |
internal male genitalia | 1.84e-11 | 3 |
atrioventricular valve | 1.07e-08 | 2 |
duct of male reproductive system | 1.07e-08 | 4 |
cardiac atrium | 1.33e-08 | 2 |
future cardiac atrium | 1.33e-08 | 2 |
large intestine | 2.93e-08 | 11 |
open tracheal system trachea | 3.41e-08 | 2 |
major salivary gland | 5.59e-08 | 2 |
throat | 7.92e-08 | 2 |
muscle structure | 9.10e-08 | 2 |
muscle organ | 9.10e-08 | 2 |
gastrointestinal system | 1.35e-07 | 25 |
subdivision of digestive tract | 6.35e-07 | 118 |
small intestine | 9.57e-07 | 4 |