FFCP PHASE1:Hg19::chr8:128818084..128818091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:128818084..128818091,+ | |||
|coexpression_cluster_id=C1285 | |||
|description=CAGE_peak_at_chr8:128818084..128818091,+ | |||
|id=chr8:128818084..128818091,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;6.43e-14;2!CL:0002535;8.82e-14;2!CL:0002563;1.31e-07;4!CL:0000306;1.92e-07;4!CL:0002222;1.92e-07;4!CL:0002224;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.43e-14,2;CL:0002535,9.40e-14,2;CL:0002563,1.31e-07,4;CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.96e-16!239;DOID:162!6.88e-15!235;DOID:0050686!4.08e-07!137;DOID:0060058!6.90e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.97e-08;14!DOID:5409;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.90e-08,14;DOID:5409,1.40e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;8.82e-14;2!UBERON:0004801;8.82e-14;2!UBERON:0001052;1.31e-07;4!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4!UBERON:0002346;1.69e-07;4!UBERON:0000923;1.69e-07;4!UBERON:0010316;1.69e-07;4!UBERON:0005291;1.69e-07;4!UBERON:0010077;1.92e-07;4!UBERON:0005389;1.92e-07;4!UBERON:0000484;1.92e-07;4!UBERON:0000965;1.92e-07;4!UBERON:0001803;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.40e-14,2;UBERON:0004801,9.40e-14,2;UBERON:0001052,1.31e-07,4;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0,0.246301768349837,0,0,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.640456598628376,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,1.30216690771284,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0,0,0,3.02319297425131,0.20453736500431,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,3.49925536059905,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.421996129056054,0,0,6.27527055252064,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0.343972064943233,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0.39961921916426,0,0,0,1.29649318189335,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0.25426853765475,0,0,0.326587360109409,1.19730191562487,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.415045904808692,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.734210113519403,0,0,0.657852148736121,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,2.37625541935635,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0,0,0.397832444232549,0,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0.47404083519818,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,5.82684738750774,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.275684698604535,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0,0.246301768349837,0,0,0,0,0,0,0,0.154934401160603,0.710846162437108,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.640456598628376,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,1.30216690771284,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0,0,0,3.02319297425131,0.20453736500431,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,3.49925536059905,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.421996129056054,0,0,6.27527055252064,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0.343972064943233,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0.39961921916426,0,0,0,1.29649318189335,0,0.235694034616795,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.717149357331379,0,0,0,0.25426853765475,0,0,0.326587360109409,1.19730191562487,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.415045904808692,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.734210113519403,0,0,0.657852148736121,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,2.37625541935635,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.346576998451015,0,0,0.397832444232549,0,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0.0714765441766563,0.47404083519818,0,0.173858272302579,0,0.207216164163037,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,5.82684738750774,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0.534434810531121,0.275684698604535,0,0,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr8:128818084..128818091,+ | |||
}} | }} |
Latest revision as of 14:56, 31 July 2015
Short description: | p@chr8:128818084..128818091, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128818084..128818091, + |
Coexpression cluster: | C1285_small_colon_carcinoid_argyrophil_neuroectodermal_giant_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.43e-14 | 2 |
epithelial cell of cervix | 9.40e-14 | 2 |
intestinal epithelial cell | 1.31e-07 | 4 |
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.40e-14 | 2 |
cervix epithelium | 9.40e-14 | 2 |
rectum | 1.31e-07 | 4 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.90e-08 | 14 |
lung small cell carcinoma | 1.40e-07 | 4 |