FFCP PHASE1:Hg19::chr8:27491572..27491583,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:27491572..27491583,+ to FFCP PHASE1:Hg19::chr8:27491572..27491583,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51435 | |EntrezGene=51435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19000 | |HGNC=19000 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AZY7 | |UniProt=Q6AZY7 | ||
|association_with_transcript=0bp_to_NM_016240,NM_182826,uc003xga.1,uc003xgb.1_5end | |||
|cluster_id=chr8:27491572..27491583,+ | |||
|description=CAGE_peak_5_at_SCARA3_5end | |||
|id=chr8:27491572..27491583,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.11e-10!180;CL:0000327!1.50e-08!14;CL:0000057!7.21e-08!75;CL:0000499!1.28e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000327;1.93e-21;15!CL:0000499;3.13e-15;28!CL:0002540;4.06e-14;6!CL:0002582;1.21e-11;3!CL:0000708;1.35e-11;3!CL:0002570;4.22e-11;8!CL:0000153;2.60e-09;9!CL:0000447;2.60e-09;9!CL:0002583;8.20e-09;2!CL:0002092;2.39e-08;10!CL:0002334;1.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,5.69e-22,15;CL:0000499,1.26e-15,28;CL:0002540,1.31e-14,6;CL:0002582,7.04e-12,3;CL:0000708,1.25e-11,3;CL:0002570,5.38e-11,8;CL:0000153,9.81e-10,9;CL:0000447,9.81e-10,9;CL:0002583,7.96e-09,2;CL:0002092,1.24e-08,10;CL:0000151,5.87e-08,36;CL:0002334,1.14e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!4.17e-13!86;UBERON:0007284!4.17e-13!86;UBERON:0002346!3.90e-12!90;UBERON:0005743!9.29e-10!86;UBERON:0004121!1.18e-09!169;UBERON:0007023!1.74e-09!115;UBERON:0000119!2.09e-09!312;UBERON:0000153!2.33e-09!129;UBERON:0007811!2.33e-09!129;UBERON:0000924!3.54e-09!173;UBERON:0006601!3.54e-09!173;UBERON:0000033!4.03e-09!123;UBERON:0001017!4.36e-09!82;UBERON:0000073!7.21e-09!94;UBERON:0001016!7.21e-09!94;UBERON:0000483!2.08e-08!309;UBERON:0001049!2.59e-08!57;UBERON:0005068!2.59e-08!57;UBERON:0006241!2.59e-08!57;UBERON:0007135!2.59e-08!57;UBERON:0000481!5.38e-08!347;UBERON:0000064!1.17e-07!219;UBERON:0002616!1.37e-07!59;UBERON:0000477!1.48e-07!286;UBERON:0000955!1.52e-07!69;UBERON:0006238!1.52e-07!69;UBERON:0000475!2.38e-07!365;UBERON:0003056!5.28e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.35e-11;3!UBERON:0002081;4.66e-08;2!UBERON:0002133;4.66e-08;2!UBERON:0002371;6.68e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.25e-11,3;UBERON:0002081,4.22e-08,2;UBERON:0010227,4.22e-08,2;UBERON:0002133,6.43e-08,2 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0.436882744260345,0.791300934685361,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,1.42800483870977,0.313454721478088,0.572471974262113,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,1.44846518960824,1.5905718941022,2.43317435151318,0.756278537312543,0,1.58102614247627,0.196468613246569,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0.446498641420399,0.44905874525234,0.563057402416611,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,1.15235184896,0.234321431833797,0.624320153660641,0,0.597794722207204,0.117434498643765,0.323745888736263,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.336672227908132,0.375355559615893,0.554128230968366,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0,0.635795703478686,0.300091096084402,0.309157587715317,0.257640540045629,0,0.506328996723799,0.194874010322397,0.252433774244115,0,0.80823028409406,0,0.10075209822764,0.508681776931463,0,0,0,0,0.132529768321485,0,0,0,0,1.56449532329816,0,0,0,0,0.473227200159376,0.337169380156203,0.964044119533928,0,0.435758888184812,0,0.134831308160164,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0.122988438543114,1.02940686179115,0,0,0.100528972411631,0,0,2.07986957055916,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69114602428866,1.30788020649984,3.74025257686845,0.129271715757778,0,0,0,0,1.54324424557285,2.83698264046557,1.8649552531127,0,0.542621605391443,0,0,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0,1.30139853857622,2.31986643833309,0,1.27587750330633,0,0,0,0.736148950314839,1.00034104211935,0.542530047399471,0,0.178428988797162,0,0,1.50473049863859,0,2.0694614258501,0,1.10621501125022,0.260650843404249,0.587403472388222,2.05886054286514,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,3.85524234506639,6.92490728721196,6.07740954502188,1.55776328755086,2.90525946149898,0,0,0,0,0.546273504020151,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0,0,0,0,1.02580050046556,0.656029291399411,0,0.103041011647722,0.183138929636687,0,0,0,0,0.48335359146061,1.3864375540318,0.921022048356777,1.10269257987624,0.214840489736547,0.870100163485371,0.681813019328807,0.890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0.767693373934002,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.141405431953713,2.26016233240486,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.196498082026242,0,0.354761064070598,1.89996871767898,1.64647446479951,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.445234820091624,0,0,0.19924798825107,0,0.251932747854276,0.613612095012929,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.230850775511391,0,0,0.269272933229316,0.869178975376065,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0.702793337176017,0,0,0,0.789168805698781,0,0.30607276163049,2.46427660551103,0,0,0,0,0,0,0,0,0.694238953340524,0.391969589657511,0.0870592065804026,0.34945333648406,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.379864775735272,0.195551382734803,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0.815425236441684,0.209205692624666,0,0.288950589901519,0,0.410716136675979,0,0,0,1.11712960508902,0.229160424011684,2.15361907373044,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.209818352539992,0,0,0,1.42939065274673,0,0,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0.517131825446202,0.13223260174269,0.342173675768659,0,0.106787412567695,0,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0.122026264901963,0.625954653532499,0.573409195690071,0.332787154610557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| ||
|short_description=p5@SCARA3 | |||
}} | }} |
Latest revision as of 19:56, 17 September 2015
Short description: | p5@SCARA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCARA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_016240, NM_182826, uc003xga.1, uc003xgb.1_5end |
EntrezGene: | SCARA3 |
HGNC: | 19000 |
UniProt: | Q6AZY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 5.69e-22 | 15 |
stromal cell | 1.26e-15 | 28 |
mesenchymal stem cell of the bone marrow | 1.31e-14 | 6 |
visceral preadipocyte | 7.04e-12 | 3 |
leptomeningeal cell | 1.25e-11 | 3 |
mesenchymal stem cell of adipose | 5.38e-11 | 8 |
GAG secreting cell | 9.81e-10 | 9 |
carbohydrate secreting cell | 9.81e-10 | 9 |
subcutaneous preadipocyte | 7.96e-09 | 2 |
bone marrow cell | 1.24e-08 | 10 |
secretory cell | 5.87e-08 | 36 |
preadipocyte | 1.14e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.25e-11 | 3 |
cardiac atrium | 4.22e-08 | 2 |
future cardiac atrium | 4.22e-08 | 2 |
atrioventricular valve | 6.43e-08 | 2 |