FFCP PHASE1:Hg19::chr9:100615546..100615558,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:100615546..100615558,+ to FFCP PHASE1:Hg19::chr9:100615546..100615558,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2304 | |EntrezGene=2304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3806 | |HGNC=3806 | ||
|TSSclassifier=strong | |||
|UniProt=O00358 | |UniProt=O00358 | ||
|association_with_transcript=9bp_to_NM_004473,uc004axu.2_5end | |||
|cluster_id=chr9:100615546..100615558,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_4_at_FOXE1_5end | |||
|id=chr9:100615546..100615558,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.28e-20!254;CL:0002076!3.35e-14!43;CL:0000223!7.22e-09!59;CL:0000076!1.06e-08!62;CL:0002368!5.54e-08!13;CL:0002621!7.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.50e-07;1!CL:0002625;3.50e-07;1!CL:0002336;3.50e-07;1!CL:0002261;3.50e-07;1!CL:0002170;3.50e-07;1!CL:0000216;3.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.23e-07,1;CL:0002625,2.23e-07,1;CL:0000216,2.23e-07,1;CL:0002336,3.62e-07,1;CL:0002261,3.62e-07,1;CL:0002170,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.63e-20;5!UBERON:0008947;5.90e-15;29 | |||
|ontology_enrichment_disease=DOID:305!2.27e-20!106;DOID:1749!1.27e-18!14;DOID:0050687!9.72e-17!143;DOID:14566!1.57e-08!239;DOID:162!8.76e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.00e-10;14!DOID:3369;1.12e-07;1!DOID:3151;1.48e-07;1!DOID:3149;1.48e-07;1!DOID:3571;3.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.90e-11,106;DOID:1749,1.57e-10,14;DOID:0050687,1.25e-09,143;DOID:3369,1.12e-07,1;DOID:3151,1.54e-07,1;DOID:3149,1.54e-07,1;DOID:3571,6.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.30e-25!72;UBERON:0000065!2.23e-23!53;UBERON:0000072!1.88e-22!46;UBERON:0001557!7.81e-19!19;UBERON:0001737!8.13e-19!9;UBERON:0008947!6.71e-18!38;UBERON:0003258!6.71e-18!38;UBERON:0004119!2.72e-16!169;UBERON:0000925!2.72e-16!169;UBERON:0006595!2.72e-16!169;UBERON:0001007!2.11e-14!155;UBERON:0001555!2.11e-14!155;UBERON:0007026!2.11e-14!155;UBERON:0003729!7.53e-10!5;UBERON:0000166!2.28e-09!21;UBERON:0001041!3.86e-09!98;UBERON:0000974!5.97e-09!10;UBERON:0000063!1.97e-08!97;UBERON:0003343!6.24e-08!4;UBERON:0004785!6.24e-08!4;UBERON:0000064!6.84e-08!219;UBERON:0000165!8.14e-08!28;UBERON:0000930!8.14e-08!28;UBERON:0002046!8.17e-08!5;UBERON:0004117!8.17e-08!5;UBERON:0007689!8.17e-08!5;UBERON:0007123!8.17e-08!5;UBERON:0003091!8.17e-08!5;UBERON:0008814!9.71e-08!15;UBERON:0000161!1.16e-07!35;UBERON:0000077!1.61e-07!130;UBERON:0004921!1.78e-07!129;UBERON:0004185!1.78e-07!129;UBERON:0004807!3.83e-07!28;UBERON:0000344!3.94e-07!12;UBERON:0001949!7.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.69e-40;9!UBERON:0001557;2.69e-40;9!UBERON:0002046;4.63e-20;5!UBERON:0000341;4.00e-13;2!UBERON:0000072;1.29e-10;37!UBERON:0000974;1.49e-09;6!UBERON:0000065;1.97e-08;44!UBERON:0001004;9.16e-08;65!UBERON:0003729;2.26e-07;13!UBERON:0002372;3.50e-07;1!UBERON:0001136;3.50e-07;1!UBERON:0001343;3.50e-07;1!UBERON:0001961;3.50e-07;1!UBERON:0001744;3.50e-07;1!UBERON:0004910;3.50e-07;1!UBERON:0004813;3.50e-07;1!UBERON:0001042;3.50e-07;1!UBERON:0001735;3.50e-07;1!UBERON:0000344;3.98e-07;20!UBERON:0000165;5.39e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.65e-41,9;UBERON:0001557,3.04e-29,19;UBERON:0002046,6.55e-20,5;UBERON:0004117,6.55e-20,5;UBERON:0007689,6.55e-20,5;UBERON:0007123,6.55e-20,5;UBERON:0003091,6.55e-20,5;UBERON:0000341,1.77e-13,2;UBERON:0000072,3.43e-13,47;UBERON:0001004,1.03e-12,74;UBERON:0001007,5.73e-12,145;UBERON:0001555,5.73e-12,145;UBERON:0007026,5.73e-12,145;UBERON:0008814,2.23e-11,18;UBERON:0000065,3.23e-11,54;UBERON:0008947,3.23e-11,38;UBERON:0003258,3.23e-11,38;UBERON:0004119,1.82e-10,160;UBERON:0000925,1.82e-10,160;UBERON:0006595,1.82e-10,160;UBERON:0009722,4.06e-09,11;UBERON:0007690,4.06e-09,11;UBERON:0001041,1.89e-07,87;UBERON:0002372,1.97e-07,1;UBERON:0001961,1.97e-07,1;UBERON:0001744,1.97e-07,1;UBERON:0001735,1.97e-07,1;UBERON:0001136,2.23e-07,1;UBERON:0001343,2.23e-07,1;UBERON:0004910,2.23e-07,1;UBERON:0005154,2.23e-07,1;UBERON:0005295,2.23e-07,1;UBERON:0004813,2.23e-07,1;UBERON:0005297,2.23e-07,1;UBERON:0005294,2.23e-07,1;UBERON:0010141,2.23e-07,1;UBERON:0005891,2.23e-07,1;UBERON:0003729,2.74e-07,13;UBERON:0000344,4.07e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.930584281657949,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.57978255948989,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,1.44606617930089,1.8749975364507,1.08939722046203,1.66089433377768,1.48314438976181,0.392442930250692,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,1.11308705022906,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0.881931576729399,1.91530254476886,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0,0.211200673038813,0,3.45447355175002,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,1.28400018965175,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0.9555033757741,0,0,0.116241425368125,0,0,0,0,0,0,0.946656005844523,1.02256085710989,0,0.4582137370881,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,1.91910583710883,3.80903090341985,0.129177819672012,0,2.4669009767735,11.7747242814605,11.1164453927021,0.435433495793923,1.02669990325584,1.68380132536469,0.286888821570705,0.332660356546013,0.0814032686109745,0.426909383510862,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515281080091258,0.930584281657949,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0.57978255948989,1.36373060295417,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,1.44606617930089,1.8749975364507,1.08939722046203,1.66089433377768,1.48314438976181,0.392442930250692,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0,0.962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,1.11308705022906,0,0.844501632511974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0.881931576729399,1.91530254476886,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,3.06402245001834,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0,0.211200673038813,0,3.45447355175002,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.353909170043221,1.28400018965175,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0.9555033757741,0,0,0.116241425368125,0,0,0,0,0,0,0.946656005844523,1.02256085710989,0,0.4582137370881,0,0.955538938977433,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41157948686277,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0,0,0,0,1.91910583710883,3.80903090341985,0.129177819672012,0,2.4669009767735,11.7747242814605,11.1164453927021,0.435433495793923,1.02669990325584,1.68380132536469,0.286888821570705,0.332660356546013,0.0814032686109745,0.426909383510862,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@FOXE1 | |||
}} | }} |
Latest revision as of 17:56, 19 September 2015
Short description: | p4@FOXE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXE1_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 9bp_to_NM_004473, uc004axu.2_5end |
EntrezGene: | FOXE1 |
HGNC: | 3806 |
UniProt: | O00358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.23e-07 | 1 |
seminiferous tubule epithelial cell | 2.23e-07 | 1 |
Sertoli cell | 2.23e-07 | 1 |
buccal mucosa cell | 3.62e-07 | 1 |
endothelial cell of viscerocranial mucosa | 3.62e-07 | 1 |
keratinized cell of the oral mucosa | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.90e-11 | 106 |
squamous cell carcinoma | 1.57e-10 | 14 |
cell type cancer | 1.25e-09 | 143 |
peripheral primitive neuroectodermal tumor | 1.12e-07 | 1 |
skin squamous cell carcinoma | 1.54e-07 | 1 |
keratoacanthoma | 1.54e-07 | 1 |
liver cancer | 6.20e-07 | 1 |