FFCP PHASE1:Hg19::chr9:123295348..123295352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:123295348..123295352,- | |||
|description=CAGE_peak_at_chr9:123295348..123295352,- | |||
|id=chr9:123295348..123295352,- | |||
|ontology_enrichment_celltype=CL:0002076!1.50e-27!43;CL:0002368!2.34e-21!13;CL:0000223!2.60e-20!59;CL:0002159!3.43e-18!13;CL:0000066!2.31e-14!254;CL:0002202!1.02e-11!9;CL:0002632!1.02e-11!9;CL:0000349!1.15e-10!3;CL:0002577!1.15e-10!3;CL:0002621!1.53e-10!3;CL:0002166!2.43e-10!3;CL:0000622!2.71e-10!5;CL:0000068!6.62e-10!3;CL:0000069!6.62e-10!3;CL:0000307!6.62e-10!3;CL:0000377!6.62e-10!3;CL:0002328!9.20e-10!3;CL:0002251!9.71e-10!21;CL:0000362!1.28e-09!8;CL:0000154!1.44e-08!6;CL:0000150!2.45e-08!9;CL:0000240!3.29e-08!6;CL:0000311!3.29e-08!6;CL:0000079!3.29e-08!6;CL:0000237!3.29e-08!6;CL:0000036!3.29e-08!6;CL:0000357!3.29e-08!6;CL:0000114!3.29e-08!6;CL:0002536!1.15e-07!2;CL:0002077!1.60e-07!33;CL:0000317!3.50e-07!2;CL:1000448!3.50e-07!2;CL:0002308!3.50e-07!2;CL:0002140!3.50e-07!2;CL:0001014!4.19e-07!2;CL:0001016!4.19e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.98e-31;14!CL:0002577;6.27e-23;3!CL:0002621;1.31e-22;3!CL:0002166;5.18e-22;3!CL:0000349;3.11e-18;19!CL:0002536;7.46e-16;2!CL:0002077;1.88e-13;34!CL:0000312;3.76e-13;5!CL:0000362;1.27e-12;9!CL:0000240;4.74e-11;6!CL:0000311;4.74e-11;6!CL:0000079;4.74e-11;6!CL:0000237;4.74e-11;6!CL:0000307;2.87e-10;3!CL:0002368;6.51e-09;13!CL:0002202;1.15e-07;9!CL:0002632;1.15e-07;9!CL:0002076;6.32e-07;42!CL:0002537;9.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.22e-31,14;CL:0002577,6.52e-23,3;CL:0002621,1.26e-22,3;CL:0002166,3.76e-22,3;CL:0000349,2.74e-18,19;CL:0002536,6.94e-16,2;CL:0002077,1.68e-15,34;CL:0000312,2.98e-13,5;CL:0000362,8.76e-13,9;CL:0000240,3.92e-11,6;CL:0000311,3.92e-11,6;CL:0000079,3.92e-11,6;CL:0000237,3.92e-11,6;CL:0000036,3.92e-11,6;CL:0000357,3.92e-11,6;CL:0000114,3.92e-11,6;CL:0000066,7.57e-11,253;CL:0000068,3.64e-10,3;CL:0000069,3.64e-10,3;CL:0000307,3.64e-10,3;CL:0000377,3.64e-10,3;CL:0002076,7.13e-10,42;CL:0002368,7.01e-09,13;CL:0002202,1.26e-07,9;CL:0002632,1.26e-07,9;CL:0000223,7.62e-07,58;CL:0002537,8.41e-07,5;CL:0000622,8.65e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000357;4.74e-11;6!CL:0000114;4.74e-11;6!CL:0000377;2.87e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.45e-20!14;UBERON:0000158!1.45e-20!14;UBERON:0001004!2.81e-17!72;UBERON:0003124!3.38e-15!7;UBERON:0004119!6.35e-14!169;UBERON:0000925!6.35e-14!169;UBERON:0006595!6.35e-14!169;UBERON:0001987!6.73e-13!4;UBERON:0004340!6.73e-13!4;UBERON:0000065!1.52e-11!53;UBERON:0000478!4.57e-11!24;UBERON:0001949!1.53e-10!3;UBERON:0000166!4.06e-10!21;UBERON:0007196!9.13e-10!14;UBERON:0001558!9.13e-10!14;UBERON:0004815!9.20e-10!3;UBERON:0002031!9.20e-10!3;UBERON:0000165!1.03e-08!28;UBERON:0000930!1.03e-08!28;UBERON:0002090!1.78e-08!6;UBERON:0000077!2.11e-08!130;UBERON:0001044!3.05e-08!6;UBERON:0003293!3.05e-08!6;UBERON:0003294!3.05e-08!6;UBERON:0010047!3.05e-08!6;UBERON:0000167!3.05e-08!6;UBERON:0004923!3.65e-08!57;UBERON:0001708!7.75e-08!4;UBERON:0001704!7.75e-08!4;UBERON:0000485!9.21e-08!9;UBERON:0000305!9.94e-08!7;UBERON:0002185!2.07e-07!4;UBERON:0003126!3.41e-07!7;UBERON:0001005!3.41e-07!7;UBERON:0002419!3.50e-07!2;UBERON:0007771!3.50e-07!2;UBERON:0003297!3.50e-07!2;UBERON:0001821!3.50e-07!2;UBERON:0003487!3.50e-07!2;UBERON:0001820!3.50e-07!2;UBERON:0005089!3.50e-07!2;UBERON:0005088!3.50e-07!2;UBERON:0003408!4.31e-07!10;UBERON:0001041!8.93e-07!98;UBERON:0004871!9.50e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.31e-22;3!UBERON:0001987;2.39e-17;4!UBERON:0000305;4.85e-17;7!UBERON:0001708;1.15e-16;4!UBERON:0008895;1.15e-16;4!UBERON:0000478;2.89e-14;24!UBERON:0011159;1.91e-13;5!UBERON:0005631;5.56e-12;10!UBERON:0000158;5.56e-12;10!UBERON:0010371;2.75e-10;31!UBERON:0003929;5.28e-10;7!UBERON:0003126;1.52e-09;7!UBERON:0001005;1.52e-09;7!UBERON:0003350;8.22e-09;8!UBERON:0001828;8.22e-09;8!UBERON:0007196;9.67e-08;15!UBERON:0001558;9.67e-08;15!UBERON:0001003;1.23e-07;15!UBERON:0007376;1.23e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.21e-25,14;UBERON:0000158,4.21e-25,14;UBERON:0001949,1.26e-22,3;UBERON:0001987,2.46e-17,4;UBERON:0004340,2.46e-17,4;UBERON:0000305,3.88e-17,7;UBERON:0001708,9.07e-17,4;UBERON:0008895,9.07e-17,4;UBERON:0004871,5.09e-15,8;UBERON:0000478,2.62e-14,24;UBERON:0011159,1.57e-13,5;UBERON:0010188,2.31e-11,6;UBERON:0002539,2.31e-11,6;UBERON:0008816,2.31e-11,6;UBERON:0003124,3.95e-10,7;UBERON:0004923,1.77e-09,66;UBERON:0003126,2.14e-09,7;UBERON:0001005,2.14e-09,7;UBERON:0003350,8.12e-09,8;UBERON:0001828,8.12e-09,8;UBERON:0003102,2.83e-08,99;UBERON:0000153,4.92e-08,62;UBERON:0007811,4.92e-08,62;UBERON:0001003,9.95e-08,15;UBERON:0007376,9.95e-08,15;UBERON:0007383,9.95e-08,15;UBERON:0007196,1.17e-07,15;UBERON:0001558,1.17e-07,15;UBERON:0000033,3.36e-07,56 | |||
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| ||
|short_description=p@chr9:123295348..123295352,- | |||
}} | }} |
Latest revision as of 22:18, 31 July 2015
Short description: | p@chr9:123295348..123295352, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:123295348..123295352, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.22e-31 | 14 |
placental epithelial cell | 6.52e-23 | 3 |
gingival epithelial cell | 1.26e-22 | 3 |
epithelial cell of Malassez | 3.76e-22 | 3 |
extraembryonic cell | 2.74e-18 | 19 |
amniotic epithelial cell | 6.94e-16 | 2 |
ecto-epithelial cell | 1.68e-15 | 34 |
keratinocyte | 2.98e-13 | 5 |
epidermal cell | 8.76e-13 | 9 |
stratified squamous epithelial cell | 3.92e-11 | 6 |
keratin accumulating cell | 3.92e-11 | 6 |
stratified epithelial cell | 3.92e-11 | 6 |
keratinizing barrier epithelial cell | 3.92e-11 | 6 |
epithelial fate stem cell | 3.92e-11 | 6 |
stratified epithelial stem cell | 3.92e-11 | 6 |
surface ectodermal cell | 3.92e-11 | 6 |
epithelial cell | 7.57e-11 | 253 |
duct epithelial cell | 3.64e-10 | 3 |
branched duct epithelial cell | 3.64e-10 | 3 |
tracheal epithelial cell | 3.64e-10 | 3 |
tracheoblast | 3.64e-10 | 3 |
endo-epithelial cell | 7.13e-10 | 42 |
respiratory epithelial cell | 7.01e-09 | 13 |
epithelial cell of tracheobronchial tree | 1.26e-07 | 9 |
epithelial cell of lower respiratory tract | 1.26e-07 | 9 |
endodermal cell | 7.62e-07 | 58 |
amnion mesenchymal stem cell | 8.41e-07 | 5 |
acinar cell | 8.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.21e-25 | 14 |
membranous layer | 4.21e-25 | 14 |
gingival epithelium | 1.26e-22 | 3 |
placenta | 2.46e-17 | 4 |
allantois | 2.46e-17 | 4 |
amnion | 3.88e-17 | 7 |
jaw skeleton | 9.07e-17 | 4 |
splanchnocranium | 9.07e-17 | 4 |
somatic layer of lateral plate mesoderm | 5.09e-15 | 8 |
extraembryonic structure | 2.62e-14 | 24 |
primary subdivision of cranial skeletal system | 1.57e-13 | 5 |
protuberance | 2.31e-11 | 6 |
pharyngeal arch | 2.31e-11 | 6 |
embryonic head | 2.31e-11 | 6 |
chorion | 3.95e-10 | 7 |
organ component layer | 1.77e-09 | 66 |
trachea | 2.14e-09 | 7 |
respiratory airway | 2.14e-09 | 7 |
epithelium of mucosa | 8.12e-09 | 8 |
gingiva | 8.12e-09 | 8 |
surface structure | 2.83e-08 | 99 |
anterior region of body | 4.92e-08 | 62 |
craniocervical region | 4.92e-08 | 62 |
skin epidermis | 9.95e-08 | 15 |
outer epithelium | 9.95e-08 | 15 |
enveloping layer of ectoderm | 9.95e-08 | 15 |
tracheobronchial tree | 1.17e-07 | 15 |
lower respiratory tract | 1.17e-07 | 15 |
head | 3.36e-07 | 56 |