FFCP PHASE1:Hg19::chr9:131258296..131258338,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131258296..131258338,+ to FFCP PHASE1:Hg19::chr9:131258296..131258338,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4957 | |EntrezGene=4957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8114 | |HGNC=8114 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_uc004bvh.2_5end | |||
|cluster_id=chr9:131258296..131258338,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_ODF2_5end | |||
|id=chr9:131258296..131258338,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.29e-22;12!CL:0000632;1.14e-10;3!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12;CL:0000632,1.09e-10,3;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.48e-11;11!UBERON:0009497;9.72e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.68e-53;19!UBERON:0006925;1.68e-53;19!UBERON:0002423;8.53e-41;25!UBERON:0002365;4.58e-33;31!UBERON:0002330;4.58e-33;31!UBERON:0002368;3.77e-28;33!UBERON:0000949;1.07e-19;43!UBERON:0005172;4.43e-14;52!UBERON:0005173;4.43e-14;52!UBERON:0002530;1.08e-11;57!UBERON:0001007;7.21e-11;81!UBERON:0002417;2.48e-10;58!UBERON:0000916;2.48e-10;58!UBERON:0010077;2.52e-08;4!UBERON:0005389;2.52e-08;4!UBERON:0000484;2.52e-08;4!UBERON:0000965;2.52e-08;4!UBERON:0001803;2.52e-08;4!UBERON:0005177;8.84e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.61e-53,19;UBERON:0006925,1.61e-53,19;UBERON:0008836,1.61e-53,19;UBERON:0008835,2.66e-46,22;UBERON:0003894,2.66e-46,22;UBERON:0009854,2.60e-44,23;UBERON:0007499,8.24e-41,25;UBERON:0009497,8.24e-41,25;UBERON:0000015,8.24e-41,25;UBERON:0002423,8.24e-41,25;UBERON:0006235,8.24e-41,25;UBERON:0004161,8.24e-41,25;UBERON:0009856,2.92e-39,26;UBERON:0002365,5.21e-33,31;UBERON:0002330,5.21e-33,31;UBERON:0002368,2.73e-29,35;UBERON:0000949,7.09e-23,45;UBERON:0003929,3.99e-19,54;UBERON:0005172,3.99e-19,54;UBERON:0005173,3.99e-19,54;UBERON:0002530,1.56e-17,59;UBERON:0002417,3.02e-17,60;UBERON:0000916,3.02e-17,60;UBERON:0005911,1.07e-12,82;UBERON:0001041,5.57e-12,87;UBERON:0005177,2.38e-10,101;UBERON:0000490,1.43e-09,148;UBERON:0009569,2.37e-09,112;UBERON:0003914,5.86e-09,117;UBERON:0001048,7.33e-09,160;UBERON:0004921,8.24e-09,118;UBERON:0005256,1.35e-08,122;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0.738155454624648,0,0,1.47008711385542,6.33775174109154,14.7424082501644,9.45263850690247,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,1.19730191562487,0,0,0,14.9483278351644,2.65013777824443,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0.738155454624648,0,0,1.47008711385542,6.33775174109154,14.7424082501644,9.45263850690247,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0.858486162094873,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,1.19730191562487,0,0,0,14.9483278351644,2.65013777824443,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0.199882311849858,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0.432626562123789,0,0.109265571963696,0.126698501011437,0,0,0.275684698604535,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p10@ODF2 | |||
}} | }} |
Latest revision as of 19:56, 15 September 2015
Short description: | p10@ODF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ODF2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 161bp_to_uc004bvh.2_5end |
EntrezGene: | ODF2 |
HGNC: | 8114 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
hepatic stellate cell | 1.09e-10 | 3 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |