FFCP PHASE1:Hg19::chr9:137619145..137619163,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:137619145..137619163,+ to FFCP PHASE1:Hg19::chr9:137619145..137619163,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:137619145..137619163,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137619145..137619163,+ | |||
|id=chr9:137619145..137619163,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.17e-22!180;CL:0000057!1.83e-15!75;CL:0000680!1.77e-08!57;CL:0000056!1.77e-08!57;CL:0000355!1.77e-08!57;CL:0000499!2.47e-08!27;CL:0000183!2.51e-08!59;CL:0000187!3.35e-08!54;CL:0002334!9.04e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.25e-12;19!CL:0000134;3.98e-10;55!CL:0002334;2.49e-09;12!CL:0000048;1.71e-08;58!CL:0000723;4.56e-08;61!CL:0002569;5.91e-08;6!CL:0002320;8.54e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.49e-16,76;CL:0000349,1.36e-12,19;CL:0000048,7.26e-11,427;CL:0000723,2.63e-10,433;CL:0000034,1.36e-09,441;CL:0002334,2.02e-09,12;CL:0002320,2.04e-08,361;CL:0002569,5.00e-08,6;CL:0000134,8.49e-08,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!7.72e-09!24;UBERON:0000914!3.95e-08!83;UBERON:0002329!3.95e-08!83;UBERON:0003077!3.95e-08!83;UBERON:0003059!3.95e-08!83;UBERON:0007282!3.95e-08!83;UBERON:0009618!3.95e-08!83;UBERON:0007285!3.95e-08!83;UBERON:0001134!7.08e-08!61;UBERON:0002036!7.08e-08!61;UBERON:0003082!7.08e-08!61;UBERON:0002385!8.03e-08!63;UBERON:0001015!8.03e-08!63;UBERON:0000383!8.03e-08!63;UBERON:0004290!1.55e-07!70;UBERON:0005631!7.48e-07!14;UBERON:0000158!7.48e-07!14;UBERON:0004872!9.62e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.78e-10;24!UBERON:0003104;3.45e-09;7!UBERON:0009142;3.45e-09;7!UBERON:0003422;5.91e-08;6!UBERON:0004457;2.41e-07;9!UBERON:0000042;2.41e-07;9!UBERON:0003688;8.18e-07;6!UBERON:0002358;8.18e-07;6!UBERON:0003684;8.18e-07;6!UBERON:0001178;8.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.02e-10,24;UBERON:0002384,1.94e-08,371;UBERON:0003422,5.00e-08,6 | |||
|phase1_expression=1.45342703416445,7.27941781229343,1.55049844505568,1.0007329835313,2.68176656656373,4.36169262050184,7.59899634504932,0.631719873426831,0.783556884599516,0.245733936501509,0,3.27662058195258,3.16520373874144,0.37129905888014,0.994192127183747,2.01697543935533,1.20538905604795,0,2.92759679274304,0.61560529038394,3.06001036866379,0.940364164434263,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0.767175371061182,1.44575660953827,2.00535164254356,5.35932120155048,0.795285947051099,11.1926020169606,0.283604451492204,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,0,0,0,5.67099363517232,0,0,0,0,0,0.366403487860815,0,0,0,4.47274756525787,1.39293562831038,0.132409180813219,14.3418310374407,1.06400514659507,3.36406560085384,0,6.41335625884616,0.622422070799533,0.942974704487816,1.30769522490767,2.11900398702904,4.03323147135999,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.413303124703062,0,1.7308685049499,0,3.59309070908119,0,0.500474079487857,0,1.31693286264251,1.83892677479412,0.751190294532984,0.794025282120147,5.91985797773244,1.2813443329114,2.7551147150743,6.00182192168805,1.44273540933814,4.89517026086695,1.11670113798954,1.85653965465393,1.94874010322397,2.52433774244115,1.01254888506529,3.23292113637624,6.39017266529906,0.906768884048762,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0,1.56449532329816,6.43240938192885,1.38134921352481,1.39310378409594,0.721879481669586,0.828147600278907,0.674338760312407,0.482022059766964,1.32352767278873,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,1.40241773803446,0.8231480226628,5.88034845542168,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,1.44331342025273,0.231860809950154,1.17408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.66004457238855,1.55126058909333,0,2.535908257668,0.26593811658487,0,0,0,0.532844358032199,2.85955987316295,14.1081617401775,4.93944202068461,0.65147236858747,2.48774364119782,2.37585561880029,0.602878754119172,0,0.899756920638513,0,0,0,2.39624855491583,3.44585807502342,0,1.15825045334063,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,3.00102312635806,0.271265023699736,5.19927153827018,14.0958901149758,3.78485796081443,2.81139395982512,1.20378439891088,0,2.0694614258501,2.65690239414175,1.84369168541703,0.260650843404249,1.17480694477644,3.0882908142977,0,0,0,1.21251028578504,4.99306318531491,9.97887967987945,1.24053903909388,1.84154367945675,15.436305193819,1.53766979106841,2.04682899626681,4.18220194973379,0,3.23840356985577,3.72879623157567,0.164254312027618,6.75030757938707,2.44041794765914,0,0.200506470303285,0,1.7222167224691,1.82091168006717,1.44236856455367,0,0,0.784349769176855,0,0,0,0.170093705276516,1.29549549661284,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,2.01452822600355,0.660075999364704,0,0,3.21367859688319,0.193341436584244,0.308097234229289,1.22802939780904,0.551346289938122,0.429680979473094,1.30515024522806,0.340906509664404,1.15741646340759,0.165284915360978,0,0.127612712494584,0.2023155617111,3.71876439437829,10.0739950985805,0,2.15623506123262,0,0.869932992075073,0.37064843820784,0,0.744316738719335,0.632758849437452,1.5250415513906,0.511795582622668,3.42351190427136,0.318203247925937,0,0.899362287916574,1.92175920815238,1.06031162111118,0,0,0.421258456238981,0.48763373908959,0.731140468893853,3.16950440270266,0.818999468447914,5.79762271010222,1.13008116620243,1.10273068709225,1.32687795048244,0,0,1.31178950409327,0.811641507850816,0.30982349809975,0.845086807596724,0.143411352204052,1.57198465620994,0,0,1.47775344708365,2.96365403663912,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,1.19372242368845,0.890894042497916,2.76444631889309,0.994147647766298,0,0,0,0,0.19924798825107,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0.295547618953547,0,0,0.139423744278603,1.00035336054936,0.797594390929008,0.23056390438806,0,0,2.87101043758728,0.915975934018623,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0,3.21031058919516,0,0,0,0,0.394584402849391,2.41981432097328,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0.52418000472609,0.51595809741485,0.19351266257817,0.292357268344742,0.0821154570532092,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,0.213452994739353,5.99428828746391,0,0,0,0,0,0.235694034616795,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0,0,0.4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| ||
|short_description=p@chr9:137619145..137619163,+ | |||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137619145..137619163, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137619145..137619163, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.49e-16 | 76 |
extraembryonic cell | 1.36e-12 | 19 |
multi fate stem cell | 7.26e-11 | 427 |
somatic stem cell | 2.63e-10 | 433 |
stem cell | 1.36e-09 | 441 |
preadipocyte | 2.02e-09 | 12 |
connective tissue cell | 2.04e-08 | 361 |
mesenchymal stem cell of umbilical cord | 5.00e-08 | 6 |
mesenchymal cell | 8.49e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.02e-10 | 24 |
connective tissue | 1.94e-08 | 371 |
mesenchyme of umbilical cord | 5.00e-08 | 6 |