FFCP PHASE1:Hg19::chr9:139839725..139839752,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139839725..139839752,+ to FFCP PHASE1:Hg19::chr9:139839725..139839752,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=733 | |EntrezGene=733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1354 | |HGNC=1354 | ||
|TSSclassifier=strong | |||
|UniProt=P07360 | |UniProt=P07360 | ||
|association_with_transcript=12bp_to_ENST00000224181_5end | |||
|cluster_id=chr9:139839725..139839752,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_C8G_5end | |||
|id=chr9:139839725..139839752,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.72e-18!5;CL:0000457!2.72e-18!5;CL:0002191!2.72e-18!5;CL:0000097!2.72e-18!5;CL:0000831!2.72e-18!5;CL:0002028!2.72e-18!5;CL:0000163!5.83e-14!9;CL:0000181!7.62e-11!12;CL:0000417!7.62e-11!12;CL:0000668!7.62e-11!12;CL:0000414!7.62e-11!12;CL:0000412!7.62e-11!12;CL:0000182!7.62e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.75e-24;5!CL:0000182;8.00e-23;12!CL:0000163;1.30e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.67e-24,5;CL:0002028,2.67e-24,5;CL:0000182,8.16e-23,12;CL:0000163,1.28e-13,9 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.83e-24;11!UBERON:0009497;1.22e-20;13!UBERON:0000358;5.98e-09;1!UBERON:0006242;8.82e-09;1!UBERON:0003104;3.41e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.69e-12!26;UBERON:0002107!1.35e-11!19;UBERON:0006925!1.35e-11!19;UBERON:0008836!1.35e-11!19;UBERON:0009497!1.13e-10!25;UBERON:0000015!1.13e-10!25;UBERON:0002423!1.13e-10!25;UBERON:0006235!1.13e-10!25;UBERON:0004161!1.13e-10!25;UBERON:0008835!8.15e-10!22;UBERON:0003894!8.15e-10!22;UBERON:0009854!2.52e-09!23;UBERON:0002368!1.54e-08!35;UBERON:0007499!1.83e-08!25;UBERON:0009856!4.39e-08!26;UBERON:0003929!3.97e-07!54;UBERON:0005172!5.82e-07!55;UBERON:0005173!5.82e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.03e-25;19!UBERON:0006925;3.03e-25;19!UBERON:0002423;8.36e-24;25!UBERON:0002108;8.52e-15;4!UBERON:0002365;1.54e-14;31!UBERON:0002330;1.54e-14;31!UBERON:0002368;7.91e-13;33!UBERON:0000160;9.94e-11;17!UBERON:0000949;1.96e-09;43!UBERON:0005409;2.36e-08;22!UBERON:0001007;2.99e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.03e-25,19;UBERON:0006925,3.03e-25,19;UBERON:0008836,3.03e-25,19;UBERON:0009497,8.03e-24,25;UBERON:0000015,8.03e-24,25;UBERON:0002423,8.03e-24,25;UBERON:0006235,8.03e-24,25;UBERON:0004161,8.03e-24,25;UBERON:0008835,1.16e-21,22;UBERON:0003894,1.16e-21,22;UBERON:0009854,1.13e-20,23;UBERON:0007499,6.15e-19,25;UBERON:0009856,3.61e-18,26;UBERON:0002365,4.57e-15,31;UBERON:0002330,4.57e-15,31;UBERON:0002108,8.73e-15,4;UBERON:0002368,3.20e-13,35;UBERON:0000160,1.02e-10,17;UBERON:0003929,2.63e-10,54;UBERON:0005172,2.63e-10,54;UBERON:0005173,2.63e-10,54;UBERON:0000949,4.84e-10,45;UBERON:0002417,3.85e-09,60;UBERON:0000916,3.85e-09,60;UBERON:0004921,1.01e-08,118;UBERON:0001007,7.17e-08,145;UBERON:0001555,7.17e-08,145;UBERON:0007026,7.17e-08,145;UBERON:0002530,2.12e-07,59;UBERON:0005409,2.34e-07,25;UBERON:0004119,6.68e-07,160;UBERON:0000925,6.68e-07,160;UBERON:0006595,6.68e-07,160 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,224.356411634641,148.406909718322,179.600131631147,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,5.01876073875388,1.4512968087854,1.00883967391873,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.2704360999982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6219385021671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,1.08182271390393,0.33307196799782,0,11.6027135053096,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0.156980256395025,0.997270091400938,0,0,0,0,0,0,0,0,0,0,6.72277490225378,12.8316330436061,0,0.123563938946503,0,0,0,0,0,0,0,0,20.5684217282729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,1.07140615895516,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,95.991713059144,39.7520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0,0,13.1967810364585,39.1221613302084,0,0,0.235676547101626,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,13.225671012885,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,224.356411634641,148.406909718322,179.600131631147,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,5.01876073875388,1.4512968087854,1.00883967391873,2.5248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.2704360999982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.6219385021671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,1.08182271390393,0.33307196799782,0,11.6027135053096,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.78532922266653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0.156980256395025,0.997270091400938,0,0,0,0,0,0,0,0,0,0,6.72277490225378,12.8316330436061,0,0.123563938946503,0,0,0,0,0,0,0,0,20.5684217282729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,1.07140615895516,1.01105315781277,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,95.991713059144,39.7520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0,0,13.1967810364585,39.1221613302084,0,0,0.235676547101626,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,13.225671012885,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p2@C8G | |||
}} | }} |
Latest revision as of 14:23, 16 September 2015
Short description: | p2@C8G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C8G_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 12bp_to_ENST00000224181_5end |
EntrezGene: | C8G |
HGNC: | 1354 |
UniProt: | P07360 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.67e-24 | 5 |
basophil mast progenitor cell | 2.67e-24 | 5 |
hepatocyte | 8.16e-23 | 12 |
endocrine cell | 1.28e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
liver | 3.03e-25 | 19 |
digestive gland | 3.03e-25 | 19 |
liver bud | 3.03e-25 | 19 |
epithelium of foregut-midgut junction | 8.03e-24 | 25 |
anatomical boundary | 8.03e-24 | 25 |
hepatobiliary system | 8.03e-24 | 25 |
foregut-midgut junction | 8.03e-24 | 25 |
septum transversum | 8.03e-24 | 25 |
hepatic diverticulum | 1.16e-21 | 22 |
liver primordium | 1.16e-21 | 22 |
digestive tract diverticulum | 1.13e-20 | 23 |
epithelial sac | 6.15e-19 | 25 |
sac | 3.61e-18 | 26 |
exocrine gland | 4.57e-15 | 31 |
exocrine system | 4.57e-15 | 31 |
small intestine | 8.73e-15 | 4 |
endocrine gland | 3.20e-13 | 35 |
intestine | 1.02e-10 | 17 |
gut epithelium | 2.63e-10 | 54 |
abdomen element | 2.63e-10 | 54 |
abdominal segment element | 2.63e-10 | 54 |
endocrine system | 4.84e-10 | 45 |
abdominal segment of trunk | 3.85e-09 | 60 |
abdomen | 3.85e-09 | 60 |
subdivision of digestive tract | 1.01e-08 | 118 |
digestive system | 7.17e-08 | 145 |
digestive tract | 7.17e-08 | 145 |
primitive gut | 7.17e-08 | 145 |
gland | 2.12e-07 | 59 |
gastrointestinal system | 2.34e-07 | 25 |
endoderm-derived structure | 6.68e-07 | 160 |
endoderm | 6.68e-07 | 160 |
presumptive endoderm | 6.68e-07 | 160 |