FFCP PHASE1:Hg19::chr9:139981513..139981542,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139981513..139981542,+ to FFCP PHASE1:Hg19::chr9:139981513..139981542,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11253 | |EntrezGene=11253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6823 | |HGNC=6823 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000371587,ENST00000535144,ENST00000538003,ENST00000542372,ENST00000545096,ENST00000545539_5end | |||
|cluster_id=chr9:139981513..139981542,+ | |||
|description=CAGE_peak_2_at_MAN1B1_5end | |||
|id=chr9:139981513..139981542,+ | |||
|ontology_enrichment_celltype=CL:0000003!1.29e-29!722;CL:0002371!5.84e-29!591;CL:0000144!1.07e-27!625;CL:0000012!3.46e-26!682;CL:0000548!2.30e-25!679;CL:0000004!2.30e-25!679;CL:0000255!2.30e-25!679;CL:0000063!6.36e-15!578;CL:0000048!1.01e-14!430;CL:0000723!1.30e-13!436;CL:0000034!8.68e-13!444;CL:0000115!1.00e-12!35;CL:0000222!2.82e-11!119;CL:0002078!1.82e-10!44;CL:0002320!3.46e-10!365;CL:0000134!9.91e-10!358;CL:0002087!3.49e-09!119;CL:0002139!9.64e-09!24;CL:0000219!2.07e-08!390;CL:0000738!4.00e-08!140;CL:0000192!4.26e-07!42;CL:0000514!4.26e-07!42;CL:0002031!4.49e-07!124;CL:0000359!5.90e-07!32;CL:0000213!6.42e-07!57;CL:0000215!6.42e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.47e-11;36!CL:0002139;1.15e-08;24!CL:0002078;4.61e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.21e-14,427;CL:0000723,1.60e-13,433;CL:0000115,3.33e-13,36;CL:0000034,1.07e-12,441;CL:0000222,3.42e-11,121;CL:0002078,6.66e-11,45;CL:0002320,2.19e-10,361;CL:0002087,5.56e-10,115;CL:0000134,6.32e-10,354;CL:0000738,8.33e-09,136;CL:0002139,9.63e-09,24;CL:0000219,1.45e-08,386;CL:0002031,1.03e-07,120;CL:0000213,2.87e-07,58;CL:0000215,2.87e-07,58;CL:0002194,5.19e-07,59;CL:0000576,5.19e-07,59;CL:0000040,5.19e-07,59;CL:0000559,5.19e-07,59;CL:0000359,5.90e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.17e-19!216;UBERON:0000055!3.83e-14!69;UBERON:0002049!2.85e-11!79;UBERON:0007798!2.85e-11!79;UBERON:0004535!3.22e-11!110;UBERON:0001637!5.71e-11!42;UBERON:0003509!5.71e-11!42;UBERON:0004572!5.71e-11!42;UBERON:0001981!1.06e-10!60;UBERON:0007500!1.06e-10!60;UBERON:0004537!1.06e-10!60;UBERON:0006965!1.06e-10!60;UBERON:0004872!4.34e-10!84;UBERON:0002384!5.70e-10!375;UBERON:0004573!6.43e-10!33;UBERON:0004571!6.43e-10!33;UBERON:0001009!7.89e-10!113;UBERON:0002193!1.40e-09!112;UBERON:0003914!4.44e-08!118;UBERON:0002390!2.84e-07!102;UBERON:0003061!2.84e-07!102;UBERON:0000926!6.10e-07!448;UBERON:0004120!6.10e-07!448;UBERON:0006603!6.10e-07!448;UBERON:0002204!7.69e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.42e-09;33!UBERON:0004571;2.42e-09;33!UBERON:0000055;1.11e-08;65!UBERON:0001637;2.23e-08;42!UBERON:0003509;2.23e-08;42!UBERON:0004572;2.23e-08;42!UBERON:0003914;7.51e-08;74!UBERON:0007500;1.51e-07;56!UBERON:0001981;1.51e-07;56!UBERON:0004537;1.51e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.48e-19,203;UBERON:0000055,2.88e-14,68;UBERON:0002049,2.39e-11,78;UBERON:0007798,2.39e-11,78;UBERON:0004535,2.90e-11,109;UBERON:0001637,5.70e-11,42;UBERON:0003509,5.70e-11,42;UBERON:0004572,5.70e-11,42;UBERON:0007500,8.36e-11,59;UBERON:0001981,8.36e-11,59;UBERON:0004537,8.36e-11,59;UBERON:0006965,8.36e-11,59;UBERON:0002193,1.95e-10,108;UBERON:0000926,3.26e-10,315;UBERON:0004120,3.26e-10,315;UBERON:0006603,3.26e-10,315;UBERON:0002384,3.67e-10,371;UBERON:0004872,3.79e-10,83;UBERON:0004573,6.42e-10,33;UBERON:0004571,6.42e-10,33;UBERON:0001009,7.26e-10,112;UBERON:0002405,9.29e-09,93;UBERON:0003914,2.02e-08,117;UBERON:0002390,5.15e-08,98;UBERON:0003061,5.15e-08,98;UBERON:0002204,2.73e-07,167 | |||
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| ||
|short_description=p2@MAN1B1 | |||
}} | }} |
Latest revision as of 15:46, 16 September 2015
Short description: | p2@MAN1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MAN1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371587, ENST00000535144, ENST00000538003, ENST00000542372, ENST00000545096, ENST00000545539_5end |
EntrezGene: | MAN1B1 |
HGNC: | 6823 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.21e-14 | 427 |
somatic stem cell | 1.60e-13 | 433 |
endothelial cell | 3.33e-13 | 36 |
stem cell | 1.07e-12 | 441 |
mesodermal cell | 3.42e-11 | 121 |
meso-epithelial cell | 6.66e-11 | 45 |
connective tissue cell | 2.19e-10 | 361 |
nongranular leukocyte | 5.56e-10 | 115 |
mesenchymal cell | 6.32e-10 | 354 |
leukocyte | 8.33e-09 | 136 |
endothelial cell of vascular tree | 9.63e-09 | 24 |
motile cell | 1.45e-08 | 386 |
hematopoietic lineage restricted progenitor cell | 1.03e-07 | 120 |
lining cell | 2.87e-07 | 58 |
barrier cell | 2.87e-07 | 58 |
monopoietic cell | 5.19e-07 | 59 |
monocyte | 5.19e-07 | 59 |
monoblast | 5.19e-07 | 59 |
promonocyte | 5.19e-07 | 59 |
vascular associated smooth muscle cell | 5.90e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.48e-19 | 203 |
vessel | 2.88e-14 | 68 |
vasculature | 2.39e-11 | 78 |
vascular system | 2.39e-11 | 78 |
cardiovascular system | 2.90e-11 | 109 |
artery | 5.70e-11 | 42 |
arterial blood vessel | 5.70e-11 | 42 |
arterial system | 5.70e-11 | 42 |
epithelial tube open at both ends | 8.36e-11 | 59 |
blood vessel | 8.36e-11 | 59 |
blood vasculature | 8.36e-11 | 59 |
vascular cord | 8.36e-11 | 59 |
hemolymphoid system | 1.95e-10 | 108 |
mesoderm | 3.26e-10 | 315 |
mesoderm-derived structure | 3.26e-10 | 315 |
presumptive mesoderm | 3.26e-10 | 315 |
connective tissue | 3.67e-10 | 371 |
splanchnic layer of lateral plate mesoderm | 3.79e-10 | 83 |
systemic artery | 6.42e-10 | 33 |
systemic arterial system | 6.42e-10 | 33 |
circulatory system | 7.26e-10 | 112 |
immune system | 9.29e-09 | 93 |
epithelial tube | 2.02e-08 | 117 |
hematopoietic system | 5.15e-08 | 98 |
blood island | 5.15e-08 | 98 |
musculoskeletal system | 2.73e-07 | 167 |