FFCP PHASE1:Hg19::chr9:140064092..140064112,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100500811 | |EntrezGene=100500811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38930 | |HGNC=38930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-370bp_to_NR_037416_5end | |||
|cluster_id=chr9:140064092..140064112,- | |||
|coexpression_cluster_id=C744 | |||
|description=CAGE_peak_3_at_MIR3621_5end | |||
|id=chr9:140064092..140064112,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.08e-21;3!CL:0000785;3.45e-08;1!CL:0000819;3.45e-08;1!CL:0000313;7.33e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.05e-21,3;CL:0000819,3.58e-08,1;CL:0000313,8.12e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.17e-10;3!UBERON:0006298;1.65e-08;1!UBERON:0008801;1.90e-08;1!UBERON:0008425;2.43e-08;1!UBERON:0005754;2.70e-08;1!UBERON:0000358;3.45e-08;1 | |||
|ontology_enrichment_disease=DOID:305!1.12e-16!106;DOID:0050687!2.88e-13!143;DOID:162!9.11e-11!235;DOID:14566!3.37e-10!239;DOID:5093!4.98e-08!4;DOID:1612!4.98e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.62e-27;4!DOID:1612;4.62e-27;4!DOID:0060073;3.45e-08;1!DOID:8675;3.45e-08;1!DOID:2152;7.33e-08;1!DOID:12603;7.33e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.52e-27,4;DOID:1612,2.52e-27,4;DOID:0060073,3.58e-08,1;DOID:8675,3.58e-08,1;DOID:12603,4.40e-08,1;DOID:2152,8.12e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.49e-08!129;UBERON:0004185!1.49e-08!129;UBERON:0001004!1.55e-08!72;UBERON:0001041!2.83e-08!98;UBERON:0001557!2.24e-07!19;UBERON:0000065!3.87e-07!53;UBERON:0000072!4.74e-07!46;UBERON:0001007!4.83e-07!155;UBERON:0001555!4.83e-07!155;UBERON:0007026!4.83e-07!155;UBERON:0000077!7.65e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.00e-15;2!UBERON:0001044;2.96e-11;6!UBERON:0003293;2.96e-11;6!UBERON:0003294;2.96e-11;6!UBERON:0010047;2.96e-11;6!UBERON:0003408;2.96e-11;6!UBERON:0000167;2.96e-11;6!UBERON:0000310;5.98e-11;10!UBERON:0001443;5.76e-10;11!UBERON:0006947;6.13e-10;3!UBERON:0004054;6.13e-10;3!UBERON:0001736;1.65e-08;1!UBERON:0001831;1.90e-08;1!UBERON:0001567;1.90e-08;1!UBERON:0000998;2.70e-08;1!UBERON:0006868;2.70e-08;1!UBERON:0001000;7.33e-08;1!UBERON:0004911;7.33e-08;1!UBERON:0005352;7.33e-08;1!UBERON:0005904;1.16e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.00e-15,2;UBERON:0003408,2.32e-11,10;UBERON:0001044,2.97e-11,6;UBERON:0003293,2.97e-11,6;UBERON:0003294,2.97e-11,6;UBERON:0010047,2.97e-11,6;UBERON:0000167,2.97e-11,6;UBERON:0000310,4.74e-11,10;UBERON:0001443,4.66e-10,11;UBERON:0006947,6.00e-10,3;UBERON:0004054,6.00e-10,3;UBERON:0001736,1.65e-08,1;UBERON:0006298,1.65e-08,1;UBERON:0001831,1.91e-08,1;UBERON:0001567,1.91e-08,1;UBERON:0008801,1.91e-08,1;UBERON:0000998,2.71e-08,1;UBERON:0006868,2.71e-08,1;UBERON:0001000,7.10e-08,1;UBERON:0005352,7.10e-08,1;UBERON:0004911,8.12e-08,1;UBERON:0005904,1.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,1.06730766284929,1.02324015707783,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,7.63169997777094,8.00792875092179,11.8866400425461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.871517776369625,0.474541238222193,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,2.31986643833309,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0,0,0,0,0.490080431962063,1.67222857613147,0.721346064882224,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0.500547425135725,0,0,0,0,0,0,1.12284324244932,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,1.0077309914171,0,0,0,0.179736702294654,0.179021174675609,0.511572370226872,0,0,0,0,0.0927680981618513,0,1.30213880542617,7.08425999969185,0,0,0.762760950878299,0,0.344743373241465,0,0.173624994933292,0,0,0,1.54810963903714,2.95547618953547,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0.802577647298789,0,2.37191225980366,0.19566461893209,0,1.18375320854817,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.328461828212837,0,0.0882561266915003,0,0,0,0.0633107959558787,0.391102765469606,0.240476460754601,0,0,0.72045208577053,0,0.171594997861965,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.295282444544246,0.931406652723629,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.314408610199332,0.414239055347196,0,0.395223263795889,0.487170393523584,0,0,0,0,0,0.942324577501406,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0.589848616738702,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,12.061670870858,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0.236387681767936,0,0.39246546425257,0,0,0,0,0,0,0.632054446930906,0,0,0,0,0,0,13.3370481234286,0,0,3.81048345171836,0,0,0,1.11855431797792,0.098150233615243,0.243835849964539,0,0,0,0,0.467878926924211,1.59160620129095,0.118920090777569,0.11294608203896,0,2.71733118420012,0,0.218559560503957,0.470317296361523,0,0.471353094203252,0,0,0.8453114551668,0,0,0,0,0.357107877211315,0,0.240724100067505,0,14.2206077855408,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.23806443146374,1.29177819672012,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.404112318087525,0.932388670104793,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,1.00636896795513,0.320568492303233 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| ||
|short_description=p3@MIR3621 | |||
}} | }} |
Latest revision as of 16:07, 16 September 2015
Short description: | p3@MIR3621 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR3621_5end |
Coexpression cluster: | C744_breast_salivary_parotid_submaxillary_seminal_small_ductus |
Association with transcript: | -370bp_to_NR_037416_5end |
EntrezGene: | MIR3621 |
HGNC: | 38930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.05e-21 | 3 |
B-1 B cell | 3.58e-08 | 1 |
serous secreting cell | 8.12e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.00e-15 | 2 |
gland of gut | 2.32e-11 | 10 |
saliva-secreting gland | 2.97e-11 | 6 |
gland of oral region | 2.97e-11 | 6 |
gland of foregut | 2.97e-11 | 6 |
oral gland | 2.97e-11 | 6 |
oral cavity | 2.97e-11 | 6 |
breast | 4.74e-11 | 10 |
chest | 4.66e-10 | 11 |
male genital duct | 6.00e-10 | 3 |
internal male genitalia | 6.00e-10 | 3 |
submandibular gland | 1.65e-08 | 1 |
submandibular gland primordium | 1.65e-08 | 1 |
parotid gland | 1.91e-08 | 1 |
cheek | 1.91e-08 | 1 |
parotid gland primordium | 1.91e-08 | 1 |
seminal vesicle | 2.71e-08 | 1 |
seminal fluid secreting gland | 2.71e-08 | 1 |
vas deferens | 7.10e-08 | 1 |
spermatic cord | 7.10e-08 | 1 |
epithelium of female gonad | 8.12e-08 | 1 |
duct of male reproductive system | 1.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.52e-27 | 4 |
breast cancer | 2.52e-27 | 4 |
lymphatic system cancer | 3.58e-08 | 1 |
lymphosarcoma | 3.58e-08 | 1 |
acute leukemia | 4.40e-08 | 1 |
ovary epithelial cancer | 8.12e-08 | 1 |