FFCP PHASE1:Hg19::chrX:38186711..38186742,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:38186711..38186742,- to FFCP PHASE1:Hg19::chrX:38186711..38186742,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6103 | |EntrezGene=6103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10295 | |HGNC=10295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000474584_5end | |||
|cluster_id=chrX:38186711..38186742,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_RPGR_5end | |||
|id=chrX:38186711..38186742,- | |||
|ontology_enrichment_celltype=CL:0000738!5.91e-31!140;CL:0000037!7.54e-27!172;CL:0000566!7.54e-27!172;CL:0002057!5.35e-24!42;CL:0002032!5.81e-24!165;CL:0000837!5.81e-24!165;CL:0002087!4.01e-23!119;CL:0002031!1.35e-22!124;CL:0000988!3.47e-22!182;CL:0000860!2.15e-21!45;CL:0000766!5.15e-19!76;CL:0000557!6.26e-16!71;CL:0000763!1.10e-14!112;CL:0000049!1.10e-14!112;CL:0002009!7.29e-14!65;CL:0000839!3.96e-13!70;CL:0002194!4.73e-13!63;CL:0000576!4.73e-13!63;CL:0000040!4.73e-13!63;CL:0000559!4.73e-13!63;CL:0000542!4.28e-09!53;CL:0000051!4.28e-09!53;CL:0000838!5.45e-09!52;CL:0000094!8.49e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-23;33!CL:0002057;1.87e-23;33!CL:0000576;1.89e-17;48!CL:0000473;1.03e-16;39!CL:0000234;1.03e-16;39!CL:0000766;5.77e-14;69!CL:0002087;4.86e-10;104!CL:0000094;8.35e-09;8!CL:0000738;3.67e-08;136!CL:0000763;5.74e-08;100!CL:0002139;7.70e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.93e-37,136;CL:0000860,1.49e-32,42;CL:0002057,1.49e-32,42;CL:0000037,1.63e-32,168;CL:0000988,9.84e-29,177;CL:0002087,1.08e-28,115;CL:0002032,1.09e-28,161;CL:0000837,1.09e-28,161;CL:0000473,4.05e-28,48;CL:0000234,4.05e-28,48;CL:0000766,4.36e-28,72;CL:0002031,9.48e-28,120;CL:0000557,1.29e-23,67;CL:0002009,6.16e-22,61;CL:0000763,7.63e-21,108;CL:0000049,7.63e-21,108;CL:0002194,9.61e-21,59;CL:0000576,9.61e-21,59;CL:0000040,9.61e-21,59;CL:0000559,9.61e-21,59;CL:0000839,2.42e-20,66;CL:0000094,8.55e-09,8;CL:0002393,3.92e-08,9;CL:0002397,3.92e-08,9;CL:0000542,1.33e-07,53;CL:0000051,1.33e-07,53;CL:0000838,1.86e-07,52;CL:0002139,3.65e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-23;42!CL:0000049;8.45e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.14e-17!112;UBERON:0002390!2.93e-16!102;UBERON:0003061!2.93e-16!102;UBERON:0002371!8.29e-13!80;UBERON:0001474!3.11e-12!86;UBERON:0007023!3.59e-12!115;UBERON:0002405!9.63e-12!115;UBERON:0004765!7.94e-09!101;UBERON:0001434!7.94e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.49e-27,108;UBERON:0002390,3.57e-25,98;UBERON:0003061,3.57e-25,98;UBERON:0002405,5.63e-23,93;UBERON:0002371,3.54e-20,76;UBERON:0001474,4.17e-18,82;UBERON:0007023,8.17e-15,114;UBERON:0004765,1.15e-14,90;UBERON:0003081,6.88e-13,203;UBERON:0001434,2.80e-11,100 | |||
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| ||
|short_description=p3@RPGR | |||
}} | }} |
Latest revision as of 23:57, 24 September 2015
Short description: | p3@RPGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPGR_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 16bp_to_ENST00000474584_5end |
EntrezGene: | RPGR |
HGNC: | 10295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.49e-27 | 108 |
hematopoietic system | 3.57e-25 | 98 |
blood island | 3.57e-25 | 98 |
immune system | 5.63e-23 | 93 |
bone marrow | 3.54e-20 | 76 |
bone element | 4.17e-18 | 82 |
adult organism | 8.17e-15 | 114 |
skeletal element | 1.15e-14 | 90 |
lateral plate mesoderm | 6.88e-13 | 203 |
skeletal system | 2.80e-11 | 100 |