FFCP PHASE1:Mm9::chr12:120086861..120086885,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:120086861..120086885,+ to FFCP PHASE1:Mm9::chr12:120086861..120086885,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2032 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:120086861..120086885,+ | |||
|description=CAGE_peak_at_chr12:120086861..120086885,+ | |||
|id=chr12:120086861..120086885,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.69e-10!23;CL:0000337!3.69e-10!23;CL:0002609!2.19e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,2.02e-17,3;CL:0002609,5.54e-15,6;CL:0000117,4.54e-11,23;CL:0000337,4.54e-11,23;CL:0002613,3.92e-08,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33;CL:0002319,2.50e-07,43;CL:0000221,3.85e-07,44;CL:0000133,3.85e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.54e-20!34;UBERON:0001049!5.84e-20!52;UBERON:0005068!5.84e-20!52;UBERON:0006241!5.84e-20!52;UBERON:0007135!5.84e-20!52;UBERON:0002780!7.62e-16!39;UBERON:0001890!7.62e-16!39;UBERON:0006240!7.62e-16!39;UBERON:0002346!1.41e-15!71;UBERON:0003075!1.41e-15!71;UBERON:0007284!1.41e-15!71;UBERON:0002791!1.61e-15!29;UBERON:0003528!1.61e-15!29;UBERON:0001893!1.61e-15!29;UBERON:0003080!3.03e-15!40;UBERON:0003056!3.17e-15!49;UBERON:0000956!8.97e-15!21;UBERON:0001869!8.97e-15!21;UBERON:0000203!8.97e-15!21;UBERON:0001017!1.18e-14!73;UBERON:0005743!1.18e-14!73;UBERON:0000955!2.64e-14!50;UBERON:0006238!2.64e-14!50;UBERON:0000073!5.75e-14!75;UBERON:0001016!5.75e-14!75;UBERON:0002616!2.70e-13!49;UBERON:0000033!4.33e-13!63;UBERON:0002619!4.89e-11!17;UBERON:0004121!8.93e-11!102;UBERON:0000924!8.93e-11!102;UBERON:0006601!8.93e-11!102;UBERON:0000153!5.19e-10!94;UBERON:0001954!9.74e-10!7;UBERON:0003022!9.74e-10!7;UBERON:0002421!9.74e-10!7;UBERON:0000349!9.74e-10!7;UBERON:0002600!9.74e-10!7;UBERON:0007811!6.05e-08!86;UBERON:0002240!2.78e-07!6;UBERON:0005174!2.78e-07!6;UBERON:0001137!2.78e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.26e-13,7;UBERON:0003022,4.26e-13,7;UBERON:0002421,4.26e-13,7;UBERON:0000349,4.26e-13,7;UBERON:0002600,4.26e-13,7;UBERON:0002020,5.93e-12,34;UBERON:0003528,3.32e-11,29;UBERON:0002791,3.32e-11,29;UBERON:0001893,3.32e-11,29;UBERON:0000956,4.78e-09,21;UBERON:0001869,4.78e-09,21;UBERON:0000203,4.78e-09,21;UBERON:0000955,1.96e-08,47;UBERON:0006238,1.96e-08,47;UBERON:0002780,4.15e-08,39;UBERON:0001890,4.15e-08,39;UBERON:0006240,4.15e-08,39;UBERON:0002619,4.73e-08,17;UBERON:0003080,6.96e-08,40;UBERON:0001049,1.95e-07,52;UBERON:0005068,1.95e-07,52;UBERON:0006241,1.95e-07,52;UBERON:0007135,1.95e-07,52;UBERON:0000073,4.04e-07,54;UBERON:0002616,9.74e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,0.58328969722285,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0.768436610643109,0.311068836925433,0.540023753326763,1.05162480675691,1.14260393761521,0.662605622854841,1.5923803897944,1.0543001812006,2.75765635983006,0,0,0,1.45074916503213,0.457438218012048,1.04182674111352,0,0,0,0.589257170947335,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0,6.47635225796619,2.59786004602869,3.88673531961374,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.347648640384553,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,1.07783996466421,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,1.10264199027481,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0.906284817968409,1.03552062350364,0.93408612825759,0.798049746802062,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0.758091635291392,0,0.188626341386076,0.468207537349412,0,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,0.58328969722285,0,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0.768436610643109,0.311068836925433,0.540023753326763,1.05162480675691,1.14260393761521,0.662605622854841,1.5923803897944,1.0543001812006,2.75765635983006,0,0,0,1.45074916503213,0.457438218012048,1.04182674111352,0,0,0,0.589257170947335,0.284743361598206,0.745597783301202,0,0,0,0,0,0,0,0,0,6.47635225796619,2.59786004602869,3.88673531961374,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.347648640384553,0,0.41557608911912,0.648965052271031,0.101839363850316,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,1.07783996466421,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,1.10264199027481,0,0,0,0.238744688006273,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0.675022500231806,0,0.906284817968409,1.03552062350364,0.93408612825759,0.798049746802062,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0.758091635291392,0,0.188626341386076,0.468207537349412,0,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0.749431733813838,0,0,0,0,0 | ||
|short_description=p@chr12:120086861..120086885,+ | |||
}} | }} |
Latest revision as of 20:46, 4 August 2015
Short description: | p@chr12:120086861..120086885, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:120086861..120086885, + |
Coexpression cluster: | MCL_coexpression_mm9:2032 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 2.02e-17 | 3 |
neuron of cerebral cortex | 5.54e-15 | 6 |
CNS neuron (sensu Vertebrata) | 4.54e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-11 | 23 |
striatum neuron | 3.92e-08 | 3 |
neuron | 1.61e-07 | 33 |
neuronal stem cell | 1.61e-07 | 33 |
neuroblast | 1.61e-07 | 33 |
electrically signaling cell | 1.61e-07 | 33 |
neural cell | 2.50e-07 | 43 |
ectodermal cell | 3.85e-07 | 44 |
neurectodermal cell | 3.85e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.26e-13 | 7 |
lobe parts of cerebral cortex | 4.26e-13 | 7 |
hippocampal formation | 4.26e-13 | 7 |
limbic system | 4.26e-13 | 7 |
limbic lobe | 4.26e-13 | 7 |
gray matter | 5.93e-12 | 34 |
brain grey matter | 3.32e-11 | 29 |
regional part of telencephalon | 3.32e-11 | 29 |
telencephalon | 3.32e-11 | 29 |
cerebral cortex | 4.78e-09 | 21 |
cerebral hemisphere | 4.78e-09 | 21 |
pallium | 4.78e-09 | 21 |
brain | 1.96e-08 | 47 |
future brain | 1.96e-08 | 47 |
regional part of forebrain | 4.15e-08 | 39 |
forebrain | 4.15e-08 | 39 |
future forebrain | 4.15e-08 | 39 |
regional part of cerebral cortex | 4.73e-08 | 17 |
anterior neural tube | 6.96e-08 | 40 |
neural tube | 1.95e-07 | 52 |
neural rod | 1.95e-07 | 52 |
future spinal cord | 1.95e-07 | 52 |
neural keel | 1.95e-07 | 52 |
regional part of nervous system | 4.04e-07 | 54 |
regional part of brain | 9.74e-07 | 46 |