FFCP PHASE1:Mm9::chr12:88177893..88177896,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:88177893..88177896,+ to FFCP PHASE1:Mm9::chr12:88177893..88177896,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=210 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:88177893..88177896,+ | |||
|description=CAGE_peak_at_chr12:88177893..88177896,+ | |||
|id=chr12:88177893..88177896,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.31e-08!66;CL:0002320!7.30e-07!46;CL:0000134!7.30e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.09e-15,32;CL:0002032,3.09e-15,32;CL:0000037,3.09e-15,32;CL:0000837,3.09e-15,32;CL:0000084,1.03e-13,11;CL:0000827,1.03e-13,11;CL:0002320,1.44e-13,46;CL:0000134,1.44e-13,46;CL:0000219,9.56e-13,54;CL:0000838,1.69e-12,12;CL:0000542,1.80e-11,13;CL:0000051,1.80e-11,13;CL:0000068,5.50e-11,3;CL:0002202,5.50e-11,3;CL:0000069,5.50e-11,3;CL:0002632,5.50e-11,3;CL:0002368,5.50e-11,3;CL:0000307,5.50e-11,3;CL:0000377,5.50e-11,3;CL:0002031,2.80e-09,25;CL:0000034,5.66e-09,97;CL:0000791,6.17e-09,9;CL:0000789,6.17e-09,9;CL:0002420,6.17e-09,9;CL:0002419,6.17e-09,9;CL:0000790,6.17e-09,9;CL:0000738,1.43e-08,17;CL:0002087,1.43e-08,17;CL:0000624,9.53e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.30e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.44e-13,46;UBERON:0003126,5.50e-11,3;UBERON:0001005,5.50e-11,3;UBERON:0007196,5.50e-11,3;UBERON:0001558,5.50e-11,3 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,4.64843964389675,0.281577444303333,1.17032263160997,0,0,1.71200729931206,1.22388563386596,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,1.48936426801328,1.30599894569468,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,1.90509202037889,3.07532393792285,0,0.866554859253824,0.498703936075477,1.02084678131185,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,0.503587271902309,0.608261587317087,0.367093504323363,0.782391344348039,0,0,0,1.1198913730029,0,0.838913030288682,0.725362142011344,1.34437519656986,0,0.573066879877513,0.515672092277442,0,0,0,0,0.889294796111139,0.899899717281399,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.377857800533928,8.40607017234866,0,0,0,0,0,0,0.511290967734173,0.519572009205738,1.41335829804136,0.281686839553361,0,0,0,2.81438353314578,3.29367825117628,1.51657333504435,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0.662524555381181,0.484875253135222,0,0,0,0,3.83408398418945,4.19931911695385,2.1601938602421,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,1.40442637462647,0.772043721344145,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.252946148497029,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,1.34005005953453,0.476087281772027,0,0.315270288212382,0.44292937929755,0.637819074629948,0,0,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0.983609672260053,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0.485561272309963,0,0,0.590603785761546,0.307435147943927,0,0,0.712994756769443,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0,0.241251699712623,0.477489376012546,0,0,0,0,0,0,0,0.27338845544205,0,7.9889862097112,9.6566502103324,5.38979897837253,0,0,0.609958401380546,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,1.86401793926078,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0.179427713218951,0.503653849092235,0.386379188064381,0,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.526139422875686,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.16787927191189,0.233612640595526,4.64843964389675,0.281577444303333,1.17032263160997,0,0,1.71200729931206,1.22388563386596,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,1.48936426801328,1.30599894569468,0.319984845586813,0,0,0.430761996159075,0,0.190023419456374,0,0,1.90509202037889,3.07532393792285,0,0.866554859253824,0.498703936075477,1.02084678131185,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.971020706062307,0.503587271902309,0.608261587317087,0.367093504323363,0.782391344348039,0,0,0,1.1198913730029,0,0.838913030288682,0.725362142011344,1.34437519656986,0,0.573066879877513,0.515672092277442,0,0,0,0,0.889294796111139,0.899899717281399,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.377857800533928,8.40607017234866,0,0,0,0,0,0,0.511290967734173,0.519572009205738,1.41335829804136,0.281686839553361,0,0,0,2.81438353314578,3.29367825117628,1.51657333504435,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.578397427679647,0,0,0.662524555381181,0.484875253135222,0,0,0,0,3.83408398418945,4.19931911695385,2.1601938602421,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,1.40442637462647,0.772043721344145,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0.213288250535234,0.232236671860439,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.140271639780637,0.252946148497029,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,1.34005005953453,0.476087281772027,0,0.315270288212382,0.44292937929755,0.637819074629948,0,0,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0.983609672260053,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0,0,0,0,0.162886959353576,0,0,0.485561272309963,0,0,0.590603785761546,0.307435147943927,0,0,0.712994756769443,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0,0.241251699712623,0.477489376012546,0,0,0,0,0,0,0,0.27338845544205,0,7.9889862097112,9.6566502103324,5.38979897837253,0,0,0.609958401380546,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,1.86401793926078,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0.198681354781265,0.120195449519969,0.443068581523732,0,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0.179427713218951,0.503653849092235,0.386379188064381,0,0.36630324853453,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0.526139422875686,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr12:88177893..88177896,+ | |||
}} | }} |
Latest revision as of 10:42, 5 August 2015
Short description: | p@chr12:88177893..88177896, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:88177893..88177896, + |
Coexpression cluster: | MCL_coexpression_mm9:210 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.09e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.09e-15 | 32 |
hematopoietic stem cell | 3.09e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.09e-15 | 32 |
T cell | 1.03e-13 | 11 |
pro-T cell | 1.03e-13 | 11 |
connective tissue cell | 1.44e-13 | 46 |
mesenchymal cell | 1.44e-13 | 46 |
motile cell | 9.56e-13 | 54 |
lymphoid lineage restricted progenitor cell | 1.69e-12 | 12 |
lymphocyte | 1.80e-11 | 13 |
common lymphoid progenitor | 1.80e-11 | 13 |
duct epithelial cell | 5.50e-11 | 3 |
epithelial cell of tracheobronchial tree | 5.50e-11 | 3 |
branched duct epithelial cell | 5.50e-11 | 3 |
epithelial cell of lower respiratory tract | 5.50e-11 | 3 |
respiratory epithelial cell | 5.50e-11 | 3 |
tracheal epithelial cell | 5.50e-11 | 3 |
tracheoblast | 5.50e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 2.80e-09 | 25 |
stem cell | 5.66e-09 | 97 |
mature alpha-beta T cell | 6.17e-09 | 9 |
alpha-beta T cell | 6.17e-09 | 9 |
immature T cell | 6.17e-09 | 9 |
mature T cell | 6.17e-09 | 9 |
immature alpha-beta T cell | 6.17e-09 | 9 |
leukocyte | 1.43e-08 | 17 |
nongranular leukocyte | 1.43e-08 | 17 |
CD4-positive, alpha-beta T cell | 9.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.44e-13 | 46 |
trachea | 5.50e-11 | 3 |
respiratory airway | 5.50e-11 | 3 |
tracheobronchial tree | 5.50e-11 | 3 |
lower respiratory tract | 5.50e-11 | 3 |