FFCP PHASE1:Mm9::chr1:191746131..191746206,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:191746131..191746206,- to FFCP PHASE1:Mm9::chr1:191746131..191746206,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226830 | |EntrezGene=226830 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8R5A0 | |UniProt=Q8R5A0 | ||
|association_with_transcript=0bp_to_ENSMUST00000144452,NM_026796,uc007eax.1,uc011wym.1_5end | |||
|cluster_id=chr1:191746131..191746206,- | |||
|description=CAGE_peak_1_at_Smyd2_5end | |||
|id=chr1:191746131..191746206,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.65e-10!18;UBERON:0000948!3.65e-10!18;UBERON:0005498!3.65e-10!18;UBERON:0004140!3.65e-10!18;UBERON:0009881!3.65e-10!18;UBERON:0004141!3.65e-10!18;UBERON:0003084!3.65e-10!18;UBERON:0007005!3.65e-10!18;UBERON:0004139!3.65e-10!18;UBERON:0004291!3.65e-10!18;UBERON:0004535!1.50e-09!23;UBERON:0001009!1.50e-09!23;UBERON:0000073!1.82e-09!75;UBERON:0001016!1.82e-09!75;UBERON:0001017!5.71e-09!73;UBERON:0005743!5.71e-09!73;UBERON:0002021!4.60e-07!10;UBERON:0000411!4.60e-07!10;UBERON:0001950!4.60e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.82e-12,92;UBERON:0007100,3.65e-10,18;UBERON:0000948,3.65e-10,18;UBERON:0005498,3.65e-10,18;UBERON:0004140,3.65e-10,18;UBERON:0009881,3.65e-10,18;UBERON:0004141,3.65e-10,18;UBERON:0003084,3.65e-10,18;UBERON:0007005,3.65e-10,18;UBERON:0004139,3.65e-10,18;UBERON:0004291,3.65e-10,18;UBERON:0004535,1.50e-09,23;UBERON:0001009,1.50e-09,23;UBERON:0001016,1.82e-09,75;UBERON:0001017,5.71e-09,73;UBERON:0002021,4.60e-07,10;UBERON:0000411,4.60e-07,10;UBERON:0001950,4.60e-07,10;UBERON:0000073,4.81e-07,54 | |||
|phase1_expression=30.4282809499109,7.32848356042658,7.73498706962211,2.72217790176147,5.50985302940982,28.7073554969332,26.3982283872944,15.6239221364307,10.6999428835267,11.7032263160997,57.5292373237697,54.0057516398427,4.79362043807376,5.50748535239684,25.649451659806,13.3633676477285,12.5921138063066,3.62781490161973,4.66189074259512,3.81950686618227,25.1728138847167,26.6099749218373,25.8587791247546,19.5190755807956,25.9232487605902,13.7815671387605,21.5380998079537,20.4697671051595,16.1519906537918,23.1867719379136,35.4768817048488,66.0431900398016,49.8202477943502,15.8481681015439,56.9037690910011,64.831511689812,76.1551698858637,0.418531630736908,2.3440060335714,2.61761871986899,0.588231488031014,0,0,52.6248699137913,57.3793430702452,62.7729892392951,28.9484797408774,18.7501634487184,20.8701873597748,14.1933826324227,38.7762387902254,31.6255641602937,1.51004345451963,5.80289713609076,12.4354705682712,43.734104126111,37.8224140719159,29.9089813520917,24.4802917640113,28.0365219014177,28.5224131577781,36.9340539955354,51.5790981744461,28.7967909530048,18.7884608887725,21.314403448383,23.668408730954,16.5213871288268,24.0559900555668,22.4109857630606,24.8183454394631,58.5584518027797,50.7997644188711,23.885705846916,16.4854210151367,33.0918763179608,61.6648933596577,55.5439920670567,60.3673675697037,29.278755876103,24.9761267034578,27.0874952689515,89.0593766814405,72.033614084055,58.9801236418487,48.0244594322078,45.1318228133156,36.9070902734095,64.3672643332064,33.2514864469856,22.8992946074325,20.6501730475533,33.3185953516798,38.8586297979228,27.2906095328021,30.9138552097162,38.0604378557048,47.8909206444342,42.0853327456647,42.4007489412408,33.6615773266266,53.8971205140135,50.9610479413291,85.3280043783997,29.8757636595475,24.3225470856095,29.3204178108574,22.4942243046548,10.8753911131812,42.1575674944102,35.0440360067594,31.0554787878384,29.9800146432876,30.4459733916298,32.4544831694545,38.0769771728917,17.5508427091405,16.4843266888699,25.6537060065464,54.8389621321717,34.6721183982818,27.1530141755724,20.5030937339934,24.3008061519584,29.3225389538837,22.7356779135646,21.9261677845834,26.3957201637099,19.4417447421789,70.2518098808618,26.5350349634803,35.9371447042792,45.5419718903764,55.2345387833514,47.5834622041393,48.0234138680563,36.6621709861139,21.5224059155461,21.2287117084287,15.5726973355991,26.804811250317,30.8068819940854,29.890313547688,23.6606564002073,22.6561542173922,15.2455327138971,19.5836604329833,18.3679393224701,21.9879352791499,26.2857451433269,29.5597888595434,27.3994665534469,28.9169139194622,26.8154168222068,23.4591635505056,31.8454826909589,21.7686088067103,15.4408744268829,26.9955324425813,54.474078176837,56.9898325754064,65.5425903718094,67.4722496417849,85.9859692736155,73.431145734392,95.3389173476672,103.016986137454,99.3673063544612,97.5839909986939,78.9645502220448,79.3663645453928,76.1701934485981,63.2304332038226,65.2243195175407,39.9550902271842,48.2622632058844,2.97376904685418,20.3626936330929,36.472290841525,33.6743174197636,37.6292987060513,32.2693639397348,30.6881700505921,34.2406127002606,20.8792787079585,34.5867804920423,30.6628954736329,29.6445143341315,34.3136793329651,18.8752075817387,22.9106332867176,17.5244320463843,30.15719625154,29.7046132785295,24.7957018480777,22.6052973908299,21.5287260756065,25.319030980405,23.2710456617267,20.8130308651239,21.0378295307442,20.8541207027843,24.0126627940591,23.3583148002532,21.6214894624523,19.7878658898671,17.4459704394113,18.8118184606885,20.1154422907322,19.2756412092043,16.0513874507285,23.3377201209869,12.9391385874619,15.6299198020771,21.5305994449047,17.9331003342449,24.3980482389801,15.9206362049911,11.4546977903295,43.0145504719,40.5782791340644,32.5910564688361,31.4484932706593,19.4307258632506,13.0924002487308,17.5620283072019,15.2906089783005,20.3747514476873,19.6129365448709,12.2897486036803,11.3972088031491,10.5593812764503,22.6186925908908,19.5806046174735,27.047035016047,27.0418011378638,69.8395066446895,61.7705588340911,69.5084168397104,103.765551080997,47.0107246930222,39.0438744296638,38.9916349896366,47.3158219946053,36.5389825495126,44.4430153338467,46.148419990938,38.5777732442932,35.9711877931336,59.4444435380343,38.3238230062325,47.3654505754899,43.6537051067584,27.5500105364134,41.1509928853885,31.3187020639926,37.1857975066644,30.7426280002114,41.637566896189,37.5070880491592,32.5619649391959,49.8041209384183,43.1361827845513,47.7215504483082,54.8176764589994,41.2542172992747,35.0652793926402,27.9094695748531,34.9268446213437,30.4358589744861,24.8276327099183,27.4687979107189,30.4415688113924,30.1420299623453,36.6087864579388,30.9274823461177,26.9044645627054,21.1054403765094,25.9957726980408,26.2361223437478,32.8273946008625,32.8281799490123,29.4395644996149,69.5344882539411,9.7396402054776,23.5281029478074,18.3342582096015,13.5625289043378,11.2089266731241,11.6676868335327,34.1656644287649,25.1912614182584,26.9489948918626,21.9574242143476,31.1590953677418,29.0746837991394,3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|phase1_expression=30.4282809499109,7.32848356042658,7.73498706962211,2.72217790176147,5.50985302940982,28.7073554969332,26.3982283872944,15.6239221364307,10.6999428835267,11.7032263160997,57.5292373237697,54.0057516398427,4.79362043807376,5.50748535239684,25.649451659806,13.3633676477285,12.5921138063066,3.62781490161973,4.66189074259512,3.81950686618227,25.1728138847167,26.6099749218373,25.8587791247546,19.5190755807956,25.9232487605902,13.7815671387605,21.5380998079537,20.4697671051595,16.1519906537918,23.1867719379136,35.4768817048488,66.0431900398016,49.8202477943502,15.8481681015439,56.9037690910011,64.831511689812,76.1551698858637,0.418531630736908,2.3440060335714,2.61761871986899,0.588231488031014,0,0,52.6248699137913,57.3793430702452,62.7729892392951,28.9484797408774,18.7501634487184,20.8701873597748,14.1933826324227,38.7762387902254,31.6255641602937,1.51004345451963,5.80289713609076,12.4354705682712,43.734104126111,37.8224140719159,29.9089813520917,24.4802917640113,28.0365219014177,28.5224131577781,36.9340539955354,51.5790981744461,28.7967909530048,18.7884608887725,21.314403448383,23.668408730954,16.5213871288268,24.0559900555668,22.4109857630606,24.8183454394631,58.5584518027797,50.7997644188711,23.885705846916,16.4854210151367,33.0918763179608,61.6648933596577,55.5439920670567,60.3673675697037,29.278755876103,24.9761267034578,27.0874952689515,89.0593766814405,72.033614084055,58.9801236418487,48.0244594322078,45.1318228133156,36.9070902734095,64.3672643332064,33.2514864469856,22.8992946074325,20.6501730475533,33.3185953516798,38.8586297979228,27.2906095328021,30.9138552097162,38.0604378557048,47.8909206444342,42.0853327456647,42.4007489412408,33.6615773266266,53.8971205140135,50.9610479413291,85.3280043783997,29.8757636595475,24.3225470856095,29.3204178108574,22.4942243046548,10.8753911131812,42.1575674944102,35.0440360067594,31.0554787878384,29.9800146432876,30.4459733916298,32.4544831694545,38.0769771728917,17.5508427091405,16.4843266888699,25.6537060065464,54.8389621321717,34.6721183982818,27.1530141755724,20.5030937339934,24.3008061519584,29.3225389538837,22.7356779135646,21.9261677845834,26.3957201637099,19.4417447421789,70.2518098808618,26.5350349634803,35.9371447042792,45.5419718903764,55.2345387833514,47.5834622041393,48.0234138680563,36.6621709861139,21.5224059155461,21.2287117084287,15.5726973355991,26.804811250317,30.8068819940854,29.890313547688,23.6606564002073,22.6561542173922,15.2455327138971,19.5836604329833,18.3679393224701,21.9879352791499,26.2857451433269,29.5597888595434,27.3994665534469,28.9169139194622,26.8154168222068,23.4591635505056,31.8454826909589,21.7686088067103,15.4408744268829,26.9955324425813,54.474078176837,56.9898325754064,65.5425903718094,67.4722496417849,85.9859692736155,73.431145734392,95.3389173476672,103.016986137454,99.3673063544612,97.5839909986939,78.9645502220448,79.3663645453928,76.1701934485981,63.2304332038226,65.2243195175407,39.9550902271842,48.2622632058844,2.97376904685418,20.3626936330929,36.472290841525,33.6743174197636,37.6292987060513,32.2693639397348,30.6881700505921,34.2406127002606,20.8792787079585,34.5867804920423,30.6628954736329,29.6445143341315,34.3136793329651,18.8752075817387,22.9106332867176,17.5244320463843,30.15719625154,29.7046132785295,24.7957018480777,22.6052973908299,21.5287260756065,25.319030980405,23.2710456617267,20.8130308651239,21.0378295307442,20.8541207027843,24.0126627940591,23.3583148002532,21.6214894624523,19.7878658898671,17.4459704394113,18.8118184606885,20.1154422907322,19.2756412092043,16.0513874507285,23.3377201209869,12.9391385874619,15.6299198020771,21.5305994449047,17.9331003342449,24.3980482389801,15.9206362049911,11.4546977903295,43.0145504719,40.5782791340644,32.5910564688361,31.4484932706593,19.4307258632506,13.0924002487308,17.5620283072019,15.2906089783005,20.3747514476873,19.6129365448709,12.2897486036803,11.3972088031491,10.5593812764503,22.6186925908908,19.5806046174735,27.047035016047,27.0418011378638,69.8395066446895,61.7705588340911,69.5084168397104,103.765551080997,47.0107246930222,39.0438744296638,38.9916349896366,47.3158219946053,36.5389825495126,44.4430153338467,46.148419990938,38.5777732442932,35.9711877931336,59.4444435380343,38.3238230062325,47.3654505754899,43.6537051067584,27.5500105364134,41.1509928853885,31.3187020639926,37.1857975066644,30.7426280002114,41.637566896189,37.5070880491592,32.5619649391959,49.8041209384183,43.1361827845513,47.7215504483082,54.8176764589994,41.2542172992747,35.0652793926402,27.9094695748531,34.9268446213437,30.4358589744861,24.8276327099183,27.4687979107189,30.4415688113924,30.1420299623453,36.6087864579388,30.9274823461177,26.9044645627054,21.1054403765094,25.9957726980408,26.2361223437478,32.8273946008625,32.8281799490123,29.4395644996149,69.5344882539411,9.7396402054776,23.5281029478074,18.3342582096015,13.5625289043378,11.2089266731241,11.6676868335327,34.1656644287649,25.1912614182584,26.9489948918626,21.9574242143476,31.1590953677418,29.0746837991394,3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| ||
|short_description=p1@Smyd2 | |||
}} | }} |
Latest revision as of 23:45, 26 September 2015
Short description: | p1@Smyd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Smyd2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000144452, NM_026796, uc007eax.1, uc011wym.1_5end |
EntrezGene: | Smyd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.82e-12 | 92 |
primary circulatory organ | 3.65e-10 | 18 |
heart | 3.65e-10 | 18 |
primitive heart tube | 3.65e-10 | 18 |
primary heart field | 3.65e-10 | 18 |
anterior lateral plate mesoderm | 3.65e-10 | 18 |
heart tube | 3.65e-10 | 18 |
heart primordium | 3.65e-10 | 18 |
cardiac mesoderm | 3.65e-10 | 18 |
cardiogenic plate | 3.65e-10 | 18 |
heart rudiment | 3.65e-10 | 18 |
cardiovascular system | 1.50e-09 | 23 |
circulatory system | 1.50e-09 | 23 |
nervous system | 1.82e-09 | 75 |
central nervous system | 5.71e-09 | 73 |
occipital lobe | 4.60e-07 | 10 |
visual cortex | 4.60e-07 | 10 |
neocortex | 4.60e-07 | 10 |
regional part of nervous system | 4.81e-07 | 54 |