FFCP PHASE1:Mm9::chr4:122782389..122782411,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr4:122782389..122782411,+ to FFCP PHASE1:Mm9::chr4:122782389..122782411,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12164 | |EntrezGene=12164 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P55105 | |UniProt=P55105 | ||
|association_with_transcript=0bp_to_ENSMUST00000002457,NM_007559,uc008uot.1_5end | |||
|cluster_id=chr4:122782389..122782411,+ | |||
|description=CAGE_peak_1_at_Bmp8b_5end | |||
|id=chr4:122782389..122782411,+ | |||
|ontology_enrichment_celltype=CL:0000075!3.67e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.38e-12,6;CL:0000677,6.38e-12,6;CL:0000584,6.38e-12,6;CL:0000349,1.08e-10,3;CL:0000351,1.08e-10,3;CL:0000075,3.52e-10,7;CL:0000682,5.39e-10,3;CL:0000066,3.37e-08,25;CL:0002563,7.46e-08,9;CL:0002251,7.46e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.92e-10!15;UBERON:0000160!9.55e-09!43;UBERON:0001242!2.37e-08!13;UBERON:0000060!2.37e-08!13;UBERON:0001262!2.37e-08!13;UBERON:0004786!2.37e-08!13;UBERON:0004923!3.86e-08!24;UBERON:0005409!1.18e-07!59;UBERON:0004119!2.25e-07!130;UBERON:0000925!2.25e-07!130;UBERON:0006595!2.25e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.30e-22,15;UBERON:0000160,2.23e-20,31;UBERON:0004923,2.80e-18,24;UBERON:0001242,1.22e-16,13;UBERON:0001262,1.22e-16,13;UBERON:0004786,1.22e-16,13;UBERON:0005409,5.12e-14,47;UBERON:0000358,1.08e-10,3;UBERON:0000307,1.08e-10,3;UBERON:0007010,1.08e-10,3;UBERON:0004119,2.72e-09,118;UBERON:0000925,2.72e-09,118;UBERON:0006595,2.72e-09,118;UBERON:0000331,3.08e-09,3;UBERON:0002116,3.08e-09,3;UBERON:0001204,3.08e-09,3;UBERON:0001168,3.08e-09,3;UBERON:0003350,7.46e-08,9;UBERON:0004808,7.46e-08,9;UBERON:0001277,7.46e-08,9;UBERON:0001007,1.66e-07,116;UBERON:0001555,1.66e-07,116;UBERON:0007026,1.66e-07,116;UBERON:0001962,2.01e-07,2;UBERON:0001961,2.01e-07,2;UBERON:0001744,2.01e-07,2;UBERON:0002108,4.98e-07,4;UBERON:0001987,6.49e-07,2;UBERON:0003124,6.49e-07,2;UBERON:0004340,6.49e-07,2;UBERON:0001155,9.07e-07,2;UBERON:0000059,9.07e-07,2 | |||
|phase1_expression=0,41.8770489167233,60.9698980781978,0.90739263392049,1.50268718983904,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,36.7982572424835,51.8464975211804,35.0281498110162,15.9381938578858,20.2542958724736,4.75058548640935,2.77233142735924,8.20402889424627,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,29.2387673494333,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.988779870937496,0.144599356919912,0,0,0,0,7.45567044872489,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,9.25172592354634,3.17340679996253,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,3.32170343081158,0.329397909448022,0.251335208800269,0,0,1.79763881730844,6.26800344636613,3.38540164532424,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0.899448449539415,0.202860121388503,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0.896987067609561,2.41221760681684,0,0,0,0,0.704070744865506,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16277757740163,10.1679394014634,1.32317038832977,0,0,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,2.33306951925227,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.838874755405687,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,99.671693064955,164.894068448216,94.3511543966121,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,41.8770489167233,60.9698980781978,0.90739263392049,1.50268718983904,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,36.7982572424835,51.8464975211804,35.0281498110162,15.9381938578858,20.2542958724736,4.75058548640935,2.77233142735924,8.20402889424627,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,29.2387673494333,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0.988779870937496,0.144599356919912,0,0,0,0,7.45567044872489,0,0,3.83185582812887,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,9.25172592354634,3.17340679996253,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,3.32170343081158,0.329397909448022,0.251335208800269,0,0,1.79763881730844,6.26800344636613,3.38540164532424,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.83422552858047,0.196558995113203,0.899448449539415,0.202860121388503,0.482354319504834,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0.896987067609561,2.41221760681684,0,0,0,0,0.704070744865506,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16277757740163,10.1679394014634,1.32317038832977,0,0,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.330613822901344,0,2.33306951925227,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.838874755405687,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,99.671693064955,164.894068448216,94.3511543966121,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.282328141245992,0.169229215783353,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p1@Bmp8b | |||
}} | }} |
Latest revision as of 07:19, 26 September 2015
Short description: | p1@Bmp8b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bmp8b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000002457, NM_007559, uc008uot.1_5end |
EntrezGene: | Bmp8b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.38e-12 | 6 |
gut absorptive cell | 6.38e-12 | 6 |
enterocyte | 6.38e-12 | 6 |
extraembryonic cell | 1.08e-10 | 3 |
trophoblast cell | 1.08e-10 | 3 |
columnar/cuboidal epithelial cell | 3.52e-10 | 7 |
M cell of gut | 5.39e-10 | 3 |
epithelial cell | 3.37e-08 | 25 |
intestinal epithelial cell | 7.46e-08 | 9 |
epithelial cell of alimentary canal | 7.46e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.30e-22 | 15 |
intestine | 2.23e-20 | 31 |
organ component layer | 2.80e-18 | 24 |
intestinal mucosa | 1.22e-16 | 13 |
wall of intestine | 1.22e-16 | 13 |
gastrointestinal system mucosa | 1.22e-16 | 13 |
gastrointestinal system | 5.12e-14 | 47 |
blastocyst | 1.08e-10 | 3 |
blastula | 1.08e-10 | 3 |
cleaving embryo | 1.08e-10 | 3 |
endoderm-derived structure | 2.72e-09 | 118 |
endoderm | 2.72e-09 | 118 |
presumptive endoderm | 2.72e-09 | 118 |
ileal mucosa | 3.08e-09 | 3 |
ileum | 3.08e-09 | 3 |
mucosa of small intestine | 3.08e-09 | 3 |
wall of small intestine | 3.08e-09 | 3 |
epithelium of mucosa | 7.46e-08 | 9 |
gastrointestinal system epithelium | 7.46e-08 | 9 |
intestinal epithelium | 7.46e-08 | 9 |
digestive system | 1.66e-07 | 116 |
digestive tract | 1.66e-07 | 116 |
primitive gut | 1.66e-07 | 116 |
gut-associated lymphoid tissue | 2.01e-07 | 2 |
mucosa-associated lymphoid tissue | 2.01e-07 | 2 |
lymphoid tissue | 2.01e-07 | 2 |
small intestine | 4.98e-07 | 4 |
placenta | 6.49e-07 | 2 |
chorion | 6.49e-07 | 2 |
allantois | 6.49e-07 | 2 |
colon | 9.07e-07 | 2 |
large intestine | 9.07e-07 | 2 |