FFCP PHASE1:Hg19::chr10:101989315..101989368,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1147 | |EntrezGene=1147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1974 | |HGNC=1974 | ||
|TSSclassifier=strong | |||
|UniProt=O15111 | |UniProt=O15111 | ||
|association_with_transcript=0bp_to_NM_001278,uc001kqp.2_5end | |association_with_transcript=0bp_to_NM_001278,uc001kqp.2_5end | ||
|cluster_id=chr10:101989315..101989368,- | |||
|description=CAGE_peak_1_at_CHUK_5end | |description=CAGE_peak_1_at_CHUK_5end | ||
|id=chr10:101989315..101989368,- | |id=chr10:101989315..101989368,- | ||
|ontology_enrichment_celltype=CL:0000738!7.02e-36!140;CL:0000037!3.95e-35!172;CL:0000566!3.95e-35!172;CL:0002032!1.73e-33!165;CL:0000837!1.73e-33!165;CL:0002087!7.24e-31!119;CL:0002031!5.32e-30!124;CL:0000988!5.41e-30!182;CL:0000766!8.27e-26!76;CL:0002009!1.42e-25!65;CL:0000763!1.45e-25!112;CL:0000049!1.45e-25!112;CL:0002194!2.71e-24!63;CL:0000576!2.71e-24!63;CL:0000040!2.71e-24!63;CL:0000559!2.71e-24!63;CL:0000557!1.71e-23!71;CL:0000839!7.89e-23!70;CL:0000860!5.23e-17!45;CL:0002057!3.37e-16!42;CL:0000134!1.75e-08!358;CL:0000219!1.02e-07!390;CL:0000542!1.35e-07!53;CL:0000051!1.35e-07!53;CL:0000838!2.77e-07!52;CL:0002320!6.47e-07!365 | |ontology_enrichment_celltype=CL:0000738!7.02e-36!140;CL:0000037!3.95e-35!172;CL:0000566!3.95e-35!172;CL:0002032!1.73e-33!165;CL:0000837!1.73e-33!165;CL:0002087!7.24e-31!119;CL:0002031!5.32e-30!124;CL:0000988!5.41e-30!182;CL:0000766!8.27e-26!76;CL:0002009!1.42e-25!65;CL:0000763!1.45e-25!112;CL:0000049!1.45e-25!112;CL:0002194!2.71e-24!63;CL:0000576!2.71e-24!63;CL:0000040!2.71e-24!63;CL:0000559!2.71e-24!63;CL:0000557!1.71e-23!71;CL:0000839!7.89e-23!70;CL:0000860!5.23e-17!45;CL:0002057!3.37e-16!42;CL:0000134!1.75e-08!358;CL:0000219!1.02e-07!390;CL:0000542!1.35e-07!53;CL:0000051!1.35e-07!53;CL:0000838!2.77e-07!52;CL:0002320!6.47e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.34e-14;39!CL:0000234;1.34e-14;39!CL:0000860;1.60e-14;33!CL:0002057;1.60e-14;33!CL:0000576;2.59e-12;48!CL:0000766;2.88e-10;69!CL:0000738;1.05e-08;136!CL:0002087;7.84e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.61e-35,136;CL:0000037,5.80e-34,168;CL:0002032,2.43e-32,161;CL:0000837,2.43e-32,161;CL:0002087,8.71e-30,115;CL:0000988,1.35e-29,177;CL:0002031,6.44e-29,120;CL:0000766,7.71e-25,72;CL:0002009,1.16e-24,61;CL:0000763,1.61e-24,108;CL:0000049,1.61e-24,108;CL:0002194,2.22e-23,59;CL:0000576,2.22e-23,59;CL:0000040,2.22e-23,59;CL:0000559,2.22e-23,59;CL:0000557,1.56e-22,67;CL:0000839,7.15e-22,66;CL:0000473,3.80e-19,48;CL:0000234,3.80e-19,48;CL:0000860,3.37e-16,42;CL:0002057,3.37e-16,42;CL:0000134,3.16e-08,354;CL:0000542,1.35e-07,53;CL:0000051,1.35e-07,53;CL:0000219,1.81e-07,386;CL:0000838,2.77e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-12;42!CL:0000049;2.63e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.64e-22!102;UBERON:0003061!3.64e-22!102;UBERON:0002371!3.42e-18!80;UBERON:0002193!9.58e-18!112;UBERON:0001474!1.41e-17!86;UBERON:0002405!1.30e-15!115;UBERON:0004765!1.29e-14!101;UBERON:0001434!1.29e-14!101;UBERON:0002384!5.84e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-21,98;UBERON:0003061,3.74e-21,98;UBERON:0002371,3.19e-17,76;UBERON:0002193,8.78e-17,108;UBERON:0001474,1.30e-16,82;UBERON:0002405,2.80e-14,93;UBERON:0004765,2.16e-13,90;UBERON:0001434,4.15e-12,100;UBERON:0002384,9.99e-07,371 | |||
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| ||
|short_description=p1@CHUK | |short_description=p1@CHUK | ||
}} | }} |
Latest revision as of 19:58, 15 September 2015
Short description: | p1@CHUK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHUK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001278, uc001kqp.2_5end |
EntrezGene: | CHUK |
HGNC: | 1974 |
UniProt: | O15111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.61e-35 | 136 |
hematopoietic stem cell | 5.80e-34 | 168 |
hematopoietic oligopotent progenitor cell | 2.43e-32 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-32 | 161 |
nongranular leukocyte | 8.71e-30 | 115 |
hematopoietic cell | 1.35e-29 | 177 |
hematopoietic lineage restricted progenitor cell | 6.44e-29 | 120 |
myeloid leukocyte | 7.71e-25 | 72 |
macrophage dendritic cell progenitor | 1.16e-24 | 61 |
myeloid cell | 1.61e-24 | 108 |
common myeloid progenitor | 1.61e-24 | 108 |
monopoietic cell | 2.22e-23 | 59 |
monocyte | 2.22e-23 | 59 |
monoblast | 2.22e-23 | 59 |
promonocyte | 2.22e-23 | 59 |
granulocyte monocyte progenitor cell | 1.56e-22 | 67 |
myeloid lineage restricted progenitor cell | 7.15e-22 | 66 |
defensive cell | 3.80e-19 | 48 |
phagocyte | 3.80e-19 | 48 |
classical monocyte | 3.37e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.37e-16 | 42 |
mesenchymal cell | 3.16e-08 | 354 |
lymphocyte | 1.35e-07 | 53 |
common lymphoid progenitor | 1.35e-07 | 53 |
motile cell | 1.81e-07 | 386 |
lymphoid lineage restricted progenitor cell | 2.77e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-21 | 98 |
blood island | 3.74e-21 | 98 |
bone marrow | 3.19e-17 | 76 |
hemolymphoid system | 8.78e-17 | 108 |
bone element | 1.30e-16 | 82 |
immune system | 2.80e-14 | 93 |
skeletal element | 2.16e-13 | 90 |
skeletal system | 4.15e-12 | 100 |
connective tissue | 9.99e-07 | 371 |