FFCP PHASE1:Hg19::chr10:126029682..126029687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126029682..126029687,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:126029682..126029687,- | |description=CAGE_peak_at_chr10:126029682..126029687,- | ||
|id=chr10:126029682..126029687,- | |id=chr10:126029682..126029687,- | ||
|ontology_enrichment_celltype=CL:0002057!1.69e-98!42;CL:0000860!1.97e-91!45;CL:0002194!3.70e-66!63;CL:0000576!3.70e-66!63;CL:0000040!3.70e-66!63;CL:0000559!3.70e-66!63;CL:0002009!6.40e-64!65;CL:0000766!4.56e-61!76;CL:0000839!7.08e-59!70;CL:0000557!5.95e-58!71;CL:0002087!1.04e-43!119;CL:0000738!1.50e-40!140;CL:0000763!4.63e-39!112;CL:0000049!4.63e-39!112;CL:0002031!2.11e-34!124;CL:0000037!1.88e-31!172;CL:0000566!1.88e-31!172;CL:0000988!2.93e-29!182;CL:0002032!2.00e-27!165;CL:0000837!2.00e-27!165;CL:0002393!4.35e-23!9;CL:0002397!4.35e-23!9;CL:0000134!3.68e-15!358;CL:0002320!1.08e-14!365;CL:0000842!1.32e-13!3;CL:0000219!4.78e-13!390;CL:0000048!8.92e-13!430;CL:0000723!1.80e-12!436;CL:0000034!4.46e-12!444;CL:0000224!2.54e-10!4;CL:0002371!2.66e-07!591;CL:0000080!5.15e-07!6 | |ontology_enrichment_celltype=CL:0002057!1.69e-98!42;CL:0000860!1.97e-91!45;CL:0002194!3.70e-66!63;CL:0000576!3.70e-66!63;CL:0000040!3.70e-66!63;CL:0000559!3.70e-66!63;CL:0002009!6.40e-64!65;CL:0000766!4.56e-61!76;CL:0000839!7.08e-59!70;CL:0000557!5.95e-58!71;CL:0002087!1.04e-43!119;CL:0000738!1.50e-40!140;CL:0000763!4.63e-39!112;CL:0000049!4.63e-39!112;CL:0002031!2.11e-34!124;CL:0000037!1.88e-31!172;CL:0000566!1.88e-31!172;CL:0000988!2.93e-29!182;CL:0002032!2.00e-27!165;CL:0000837!2.00e-27!165;CL:0002393!4.35e-23!9;CL:0002397!4.35e-23!9;CL:0000134!3.68e-15!358;CL:0002320!1.08e-14!365;CL:0000842!1.32e-13!3;CL:0000219!4.78e-13!390;CL:0000048!8.92e-13!430;CL:0000723!1.80e-12!436;CL:0000034!4.46e-12!444;CL:0000224!2.54e-10!4;CL:0002371!2.66e-07!591;CL:0000080!5.15e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002393;2.10e-41;6!CL:0002397;2.10e-41;6!CL:0000576;1.50e-27;48!CL:0000860;4.88e-26;33!CL:0002057;4.88e-26;33!CL:0000473;1.65e-25;39!CL:0000234;1.65e-25;39!CL:0000766;5.79e-22;69!CL:0002087;1.02e-08;104!CL:0000763;1.67e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.28e-51,42;CL:0002057,4.28e-51,42;CL:0000473,1.31e-44,48;CL:0000234,1.31e-44,48;CL:0002194,1.60e-35,59;CL:0000576,1.60e-35,59;CL:0000040,1.60e-35,59;CL:0000559,1.60e-35,59;CL:0002009,2.38e-34,61;CL:0000839,1.01e-31,66;CL:0000557,3.06e-31,67;CL:0000766,4.86e-29,72;CL:0002393,1.14e-27,9;CL:0002397,1.14e-27,9;CL:0002087,3.64e-21,115;CL:0000763,3.93e-19,108;CL:0000049,3.93e-19,108;CL:0000738,9.17e-18,136;CL:0002031,3.92e-17,120;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0002032,1.60e-12,161;CL:0000837,1.60e-12,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-43;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.17e-50!80;UBERON:0001474!1.25e-46!86;UBERON:0002390!1.74e-46!102;UBERON:0003061!1.74e-46!102;UBERON:0002193!1.19e-41!112;UBERON:0004765!3.34e-41!101;UBERON:0001434!3.34e-41!101;UBERON:0002405!4.81e-33!115;UBERON:0002204!4.46e-25!167;UBERON:0003081!4.94e-19!216;UBERON:0002384!4.68e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.75e-27,76;UBERON:0001474,1.98e-25,82;UBERON:0002390,5.72e-25,98;UBERON:0003061,5.72e-25,98;UBERON:0004765,4.12e-23,90;UBERON:0002193,1.37e-22,108;UBERON:0002405,2.42e-22,93;UBERON:0001434,9.99e-21,100;UBERON:0002204,4.91e-12,167;UBERON:0003081,1.45e-11,203;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|short_description=p@chr10:126029682..126029687,- | |short_description=p@chr10:126029682..126029687,- | ||
}} | }} |
Latest revision as of 11:20, 23 July 2015
Short description: | p@chr10:126029682..126029687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:126029682..126029687, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.28e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.28e-51 | 42 |
defensive cell | 1.31e-44 | 48 |
phagocyte | 1.31e-44 | 48 |
monopoietic cell | 1.60e-35 | 59 |
monocyte | 1.60e-35 | 59 |
monoblast | 1.60e-35 | 59 |
promonocyte | 1.60e-35 | 59 |
macrophage dendritic cell progenitor | 2.38e-34 | 61 |
myeloid lineage restricted progenitor cell | 1.01e-31 | 66 |
granulocyte monocyte progenitor cell | 3.06e-31 | 67 |
myeloid leukocyte | 4.86e-29 | 72 |
intermediate monocyte | 1.14e-27 | 9 |
CD14-positive, CD16-positive monocyte | 1.14e-27 | 9 |
nongranular leukocyte | 3.64e-21 | 115 |
myeloid cell | 3.93e-19 | 108 |
common myeloid progenitor | 3.93e-19 | 108 |
leukocyte | 9.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.92e-17 | 120 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.75e-27 | 76 |
bone element | 1.98e-25 | 82 |
hematopoietic system | 5.72e-25 | 98 |
blood island | 5.72e-25 | 98 |
skeletal element | 4.12e-23 | 90 |
hemolymphoid system | 1.37e-22 | 108 |
immune system | 2.42e-22 | 93 |
skeletal system | 9.99e-21 | 100 |
musculoskeletal system | 4.91e-12 | 167 |
lateral plate mesoderm | 1.45e-11 | 203 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |