FFCP PHASE1:Mm9::chr11:106884050..106884057,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1546 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:106884050..106884057,+ | |||
|description=CAGE_peak_at_chr11:106884050..106884057,+ | |description=CAGE_peak_at_chr11:106884050..106884057,+ | ||
|id=chr11:106884050..106884057,+ | |id=chr11:106884050..106884057,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.66e-09,3;CL:0002202,4.66e-09,3;CL:0000069,4.66e-09,3;CL:0002632,4.66e-09,3;CL:0002368,4.66e-09,3;CL:0000307,4.66e-09,3;CL:0000377,4.66e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.06e-18!17;UBERON:0005181!1.06e-18!17;UBERON:0002224!1.06e-18!17;UBERON:0000915!1.06e-18!17;UBERON:0008947!1.06e-18!17;UBERON:0003258!1.06e-18!17;UBERON:0002048!2.89e-14!14;UBERON:0000117!2.89e-14!14;UBERON:0000171!2.89e-14!14;UBERON:0000170!2.89e-14!14;UBERON:0005597!2.89e-14!14;UBERON:0000118!2.89e-14!14;UBERON:0005153!3.30e-11!17;UBERON:0000065!5.08e-08!41;UBERON:0001004!1.01e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,9.02e-44,17;UBERON:0005181,9.02e-44,17;UBERON:0002224,9.02e-44,17;UBERON:0000915,9.02e-44,17;UBERON:0008947,9.02e-44,17;UBERON:0003258,9.02e-44,17;UBERON:0002048,5.28e-36,14;UBERON:0000117,5.28e-36,14;UBERON:0000171,5.28e-36,14;UBERON:0000170,5.28e-36,14;UBERON:0005597,5.28e-36,14;UBERON:0000118,5.28e-36,14;UBERON:0005153,1.62e-29,17;UBERON:0005157,5.68e-25,20;UBERON:0000065,1.59e-17,41;UBERON:0001004,4.44e-17,42;UBERON:0009569,2.02e-10,66;UBERON:0000310,2.88e-10,6;UBERON:0001443,2.88e-10,6;UBERON:0003126,4.66e-09,3;UBERON:0001005,4.66e-09,3;UBERON:0007196,4.66e-09,3;UBERON:0001558,4.66e-09,3;UBERON:0005177,1.72e-08,79;UBERON:0001041,2.28e-08,80;UBERON:0000305,4.65e-08,1;UBERON:0002100,2.74e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,7.91023896749996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,4.61882975416512,0,0,0,1.40814148973101,3.68513766371995,6.66522194480839,2.53673742215138,2.36452716159286,1.55025282754142,0.318909537314974,0.983179888294428,1.20879487306127,2.60368305446721,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.576226371643824,0.114870937911227,0,0.115884325944855,0,1.23625770240992,0.883193520806384,1.02860775715625,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.22836775943812,0,0,0,0,0,0,0,0,7.91023896749996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,4.61882975416512,0,0,0,1.40814148973101,3.68513766371995,6.66522194480839,2.53673742215138,2.36452716159286,1.55025282754142,0.318909537314974,0.983179888294428,1.20879487306127,2.60368305446721,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0.576226371643824,0.114870937911227,0,0.115884325944855,0,1.23625770240992,0.883193520806384,1.02860775715625,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0,0,0,0,0,0 | ||
|short_description=p@chr11:106884050..106884057,+ | |short_description=p@chr11:106884050..106884057,+ | ||
}} | }} |
Latest revision as of 08:15, 5 August 2015
Short description: | p@chr11:106884050..106884057, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:106884050..106884057, + |
Coexpression cluster: | MCL_coexpression_mm9:1546 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.66e-09 | 3 |
epithelial cell of tracheobronchial tree | 4.66e-09 | 3 |
branched duct epithelial cell | 4.66e-09 | 3 |
epithelial cell of lower respiratory tract | 4.66e-09 | 3 |
respiratory epithelial cell | 4.66e-09 | 3 |
tracheal epithelial cell | 4.66e-09 | 3 |
tracheoblast | 4.66e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 9.02e-44 | 17 |
thoracic segment organ | 9.02e-44 | 17 |
thoracic cavity | 9.02e-44 | 17 |
thoracic segment of trunk | 9.02e-44 | 17 |
respiratory primordium | 9.02e-44 | 17 |
endoderm of foregut | 9.02e-44 | 17 |
lung | 5.28e-36 | 14 |
respiratory tube | 5.28e-36 | 14 |
respiration organ | 5.28e-36 | 14 |
pair of lungs | 5.28e-36 | 14 |
lung primordium | 5.28e-36 | 14 |
lung bud | 5.28e-36 | 14 |
epithelial bud | 1.62e-29 | 17 |
epithelial fold | 5.68e-25 | 20 |
respiratory tract | 1.59e-17 | 41 |
respiratory system | 4.44e-17 | 42 |
subdivision of trunk | 2.02e-10 | 66 |
breast | 2.88e-10 | 6 |
chest | 2.88e-10 | 6 |
trachea | 4.66e-09 | 3 |
respiratory airway | 4.66e-09 | 3 |
tracheobronchial tree | 4.66e-09 | 3 |
lower respiratory tract | 4.66e-09 | 3 |
trunk region element | 1.72e-08 | 79 |
foregut | 2.28e-08 | 80 |
amnion | 4.65e-08 | 1 |
trunk | 2.74e-07 | 90 |