FFCP PHASE1:Hg19::chr10:65467361..65467376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:65467361..65467376,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:65467361..65467376,+ | |description=CAGE_peak_at_chr10:65467361..65467376,+ | ||
|id=chr10:65467361..65467376,+ | |id=chr10:65467361..65467376,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.78e-89!42;CL:0000860!7.97e-83!45;CL:0002194!5.52e-56!63;CL:0000576!5.52e-56!63;CL:0000040!5.52e-56!63;CL:0000559!5.52e-56!63;CL:0000766!2.24e-55!76;CL:0002009!4.66e-54!65;CL:0000839!1.02e-49!70;CL:0000557!6.40e-49!71;CL:0000763!3.76e-35!112;CL:0000049!3.76e-35!112;CL:0002087!2.50e-30!119;CL:0000738!2.56e-30!140;CL:0002031!5.70e-25!124;CL:0000037!3.72e-23!172;CL:0000566!3.72e-23!172;CL:0000988!1.96e-21!182;CL:0002032!2.38e-21!165;CL:0000837!2.38e-21!165;CL:0000767!4.17e-13!3;CL:0000134!2.90e-08!358;CL:0002320!6.04e-08!365;CL:0000219!7.95e-07!390 | |ontology_enrichment_celltype=CL:0002057!2.78e-89!42;CL:0000860!7.97e-83!45;CL:0002194!5.52e-56!63;CL:0000576!5.52e-56!63;CL:0000040!5.52e-56!63;CL:0000559!5.52e-56!63;CL:0000766!2.24e-55!76;CL:0002009!4.66e-54!65;CL:0000839!1.02e-49!70;CL:0000557!6.40e-49!71;CL:0000763!3.76e-35!112;CL:0000049!3.76e-35!112;CL:0002087!2.50e-30!119;CL:0000738!2.56e-30!140;CL:0002031!5.70e-25!124;CL:0000037!3.72e-23!172;CL:0000566!3.72e-23!172;CL:0000988!1.96e-21!182;CL:0002032!2.38e-21!165;CL:0000837!2.38e-21!165;CL:0000767!4.17e-13!3;CL:0000134!2.90e-08!358;CL:0002320!6.04e-08!365;CL:0000219!7.95e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.74e-69;33!CL:0002057;2.74e-69;33!CL:0000473;1.09e-47;39!CL:0000234;1.09e-47;39!CL:0000576;1.03e-36;48!CL:0000766;9.72e-24;69!CL:0002087;1.39e-13;104!CL:0000763;5.51e-11;100!CL:0000738;5.53e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.13e-69,42;CL:0002057,3.13e-69,42;CL:0000473,2.25e-60,48;CL:0000234,2.25e-60,48;CL:0002194,5.74e-48,59;CL:0000576,5.74e-48,59;CL:0000040,5.74e-48,59;CL:0000559,5.74e-48,59;CL:0002009,2.30e-46,61;CL:0000766,2.79e-44,72;CL:0000839,8.88e-43,66;CL:0000557,4.01e-42,67;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,5.97e-24,115;CL:0002031,6.97e-23,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.74e-45;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-42!80;UBERON:0001474!3.54e-39!86;UBERON:0002390!1.22e-36!102;UBERON:0003061!1.22e-36!102;UBERON:0002193!1.07e-32!112;UBERON:0004765!2.66e-32!101;UBERON:0001434!2.66e-32!101;UBERON:0002405!1.72e-27!115;UBERON:0002204!1.14e-16!167;UBERON:0003081!2.52e-14!216;UBERON:0002384!1.64e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.36e-37,76;UBERON:0001474,3.40e-34,82;UBERON:0004765,4.94e-31,90;UBERON:0002405,5.52e-30,93;UBERON:0002390,2.23e-28,98;UBERON:0003061,2.23e-28,98;UBERON:0001434,8.82e-28,100;UBERON:0002193,1.32e-25,108;UBERON:0002204,6.07e-16,167;UBERON:0003081,8.92e-13,203;UBERON:0000926,1.71e-07,315;UBERON:0004120,1.71e-07,315;UBERON:0006603,1.71e-07,315;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p@chr10:65467361..65467376,+ | |short_description=p@chr10:65467361..65467376,+ | ||
}} | }} |
Latest revision as of 14:48, 23 July 2015
Short description: | p@chr10:65467361..65467376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:65467361..65467376, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.13e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.13e-69 | 42 |
defensive cell | 2.25e-60 | 48 |
phagocyte | 2.25e-60 | 48 |
monopoietic cell | 5.74e-48 | 59 |
monocyte | 5.74e-48 | 59 |
monoblast | 5.74e-48 | 59 |
promonocyte | 5.74e-48 | 59 |
macrophage dendritic cell progenitor | 2.30e-46 | 61 |
myeloid leukocyte | 2.79e-44 | 72 |
myeloid lineage restricted progenitor cell | 8.88e-43 | 66 |
granulocyte monocyte progenitor cell | 4.01e-42 | 67 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
nongranular leukocyte | 5.97e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 6.97e-23 | 120 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.36e-37 | 76 |
bone element | 3.40e-34 | 82 |
skeletal element | 4.94e-31 | 90 |
immune system | 5.52e-30 | 93 |
hematopoietic system | 2.23e-28 | 98 |
blood island | 2.23e-28 | 98 |
skeletal system | 8.82e-28 | 100 |
hemolymphoid system | 1.32e-25 | 108 |
musculoskeletal system | 6.07e-16 | 167 |
lateral plate mesoderm | 8.92e-13 | 203 |
mesoderm | 1.71e-07 | 315 |
mesoderm-derived structure | 1.71e-07 | 315 |
presumptive mesoderm | 1.71e-07 | 315 |
connective tissue | 4.69e-07 | 371 |