FFCP PHASE1:Hg19::chr11:109940498..109940512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:109940498..109940512,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:109940498..109940512,+ | |description=CAGE_peak_at_chr11:109940498..109940512,+ | ||
|id=chr11:109940498..109940512,+ | |id=chr11:109940498..109940512,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.29e-64!42;CL:0000860!3.20e-59!45;CL:0002009!3.03e-47!65;CL:0002194!1.33e-43!63;CL:0000576!1.33e-43!63;CL:0000040!1.33e-43!63;CL:0000559!1.33e-43!63;CL:0000557!2.37e-42!71;CL:0000766!1.22e-41!76;CL:0000839!3.14e-38!70;CL:0000763!1.58e-34!112;CL:0000049!1.58e-34!112;CL:0000738!1.94e-26!140;CL:0000037!4.70e-25!172;CL:0000566!4.70e-25!172;CL:0000988!3.81e-24!182;CL:0002087!1.93e-23!119;CL:0002031!3.29e-22!124;CL:0002032!1.09e-21!165;CL:0000837!1.09e-21!165;CL:0002393!7.08e-14!9;CL:0002397!7.08e-14!9;CL:0000219!5.84e-11!390;CL:0002320!6.67e-11!365;CL:0000134!9.61e-11!358;CL:0000767!6.10e-09!3;CL:0000048!1.35e-08!430;CL:0000063!1.84e-08!578;CL:0002371!2.46e-08!591;CL:0000723!2.86e-08!436;CL:0000034!7.50e-08!444;CL:0000144!6.92e-07!625 | |ontology_enrichment_celltype=CL:0002057!3.29e-64!42;CL:0000860!3.20e-59!45;CL:0002009!3.03e-47!65;CL:0002194!1.33e-43!63;CL:0000576!1.33e-43!63;CL:0000040!1.33e-43!63;CL:0000559!1.33e-43!63;CL:0000557!2.37e-42!71;CL:0000766!1.22e-41!76;CL:0000839!3.14e-38!70;CL:0000763!1.58e-34!112;CL:0000049!1.58e-34!112;CL:0000738!1.94e-26!140;CL:0000037!4.70e-25!172;CL:0000566!4.70e-25!172;CL:0000988!3.81e-24!182;CL:0002087!1.93e-23!119;CL:0002031!3.29e-22!124;CL:0002032!1.09e-21!165;CL:0000837!1.09e-21!165;CL:0002393!7.08e-14!9;CL:0002397!7.08e-14!9;CL:0000219!5.84e-11!390;CL:0002320!6.67e-11!365;CL:0000134!9.61e-11!358;CL:0000767!6.10e-09!3;CL:0000048!1.35e-08!430;CL:0000063!1.84e-08!578;CL:0002371!2.46e-08!591;CL:0000723!2.86e-08!436;CL:0000034!7.50e-08!444;CL:0000144!6.92e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.73e-45;6!CL:0002397;1.73e-45;6!CL:0000860;6.03e-41;33!CL:0002057;6.03e-41;33!CL:0000576;2.46e-37;48!CL:0000473;2.16e-29;39!CL:0000234;2.16e-29;39!CL:0000766;1.25e-26;69!CL:0000767;1.26e-23;3!CL:0002567;7.36e-11;3!CL:0000763;1.45e-10;100!CL:0000094;3.27e-09;8!CL:0002087;3.59e-09;104!CL:0000081;7.98e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.46e-70,42;CL:0002057,3.46e-70,42;CL:0000473,5.38e-61,48;CL:0000234,5.38e-61,48;CL:0000766,2.90e-52,72;CL:0002194,4.05e-48,59;CL:0000576,4.05e-48,59;CL:0000040,4.05e-48,59;CL:0000559,4.05e-48,59;CL:0002009,1.86e-46,61;CL:0000839,9.84e-43,66;CL:0000557,4.70e-42,67;CL:0000763,8.88e-34,108;CL:0000049,8.88e-34,108;CL:0002393,4.23e-30,9;CL:0002397,4.23e-30,9;CL:0000738,4.23e-26,136;CL:0000767,1.17e-23,3;CL:0002087,3.33e-23,115;CL:0002031,4.25e-22,120;CL:0002032,1.77e-21,161;CL:0000837,1.77e-21,161;CL:0000037,1.98e-20,168;CL:0000988,3.36e-19,177;CL:0002567,7.36e-11,3;CL:0000094,3.18e-09,8;CL:0000219,2.21e-08,386;CL:0000134,1.28e-07,354;CL:0002320,2.17e-07,361;CL:0000081,7.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-49;42!CL:0000049;4.13e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-38!80;UBERON:0001474!4.28e-35!86;UBERON:0004765!2.13e-33!101;UBERON:0001434!2.13e-33!101;UBERON:0002193!3.39e-32!112;UBERON:0002390!3.68e-31!102;UBERON:0003061!3.68e-31!102;UBERON:0002405!6.55e-28!115;UBERON:0002204!1.17e-15!167;UBERON:0003081!1.70e-13!216;UBERON:0002384!3.24e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.79e-37,76;UBERON:0001474,7.90e-34,82;UBERON:0004765,1.51e-30,90;UBERON:0002405,1.84e-29,93;UBERON:0002390,8.53e-28,98;UBERON:0003061,8.53e-28,98;UBERON:0001434,3.56e-27,100;UBERON:0002193,6.38e-25,108;UBERON:0002204,6.56e-15,167;UBERON:0003081,4.84e-13,203;UBERON:0002384,4.43e-07,371;UBERON:0000926,4.63e-07,315;UBERON:0004120,4.63e-07,315;UBERON:0006603,4.63e-07,315 | |||
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| ||
|short_description=p@chr11:109940498..109940512,+ | |short_description=p@chr11:109940498..109940512,+ | ||
}} | }} |
Latest revision as of 17:58, 23 July 2015
Short description: | p@chr11:109940498..109940512, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:109940498..109940512, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.46e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.46e-70 | 42 |
defensive cell | 5.38e-61 | 48 |
phagocyte | 5.38e-61 | 48 |
myeloid leukocyte | 2.90e-52 | 72 |
monopoietic cell | 4.05e-48 | 59 |
monocyte | 4.05e-48 | 59 |
monoblast | 4.05e-48 | 59 |
promonocyte | 4.05e-48 | 59 |
macrophage dendritic cell progenitor | 1.86e-46 | 61 |
myeloid lineage restricted progenitor cell | 9.84e-43 | 66 |
granulocyte monocyte progenitor cell | 4.70e-42 | 67 |
myeloid cell | 8.88e-34 | 108 |
common myeloid progenitor | 8.88e-34 | 108 |
intermediate monocyte | 4.23e-30 | 9 |
CD14-positive, CD16-positive monocyte | 4.23e-30 | 9 |
leukocyte | 4.23e-26 | 136 |
basophil | 1.17e-23 | 3 |
nongranular leukocyte | 3.33e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-22 | 120 |
hematopoietic oligopotent progenitor cell | 1.77e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-21 | 161 |
hematopoietic stem cell | 1.98e-20 | 168 |
hematopoietic cell | 3.36e-19 | 177 |
light melanocyte | 7.36e-11 | 3 |
granulocyte | 3.18e-09 | 8 |
motile cell | 2.21e-08 | 386 |
mesenchymal cell | 1.28e-07 | 354 |
connective tissue cell | 2.17e-07 | 361 |
blood cell | 7.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.79e-37 | 76 |
bone element | 7.90e-34 | 82 |
skeletal element | 1.51e-30 | 90 |
immune system | 1.84e-29 | 93 |
hematopoietic system | 8.53e-28 | 98 |
blood island | 8.53e-28 | 98 |
skeletal system | 3.56e-27 | 100 |
hemolymphoid system | 6.38e-25 | 108 |
musculoskeletal system | 6.56e-15 | 167 |
lateral plate mesoderm | 4.84e-13 | 203 |
connective tissue | 4.43e-07 | 371 |
mesoderm | 4.63e-07 | 315 |
mesoderm-derived structure | 4.63e-07 | 315 |
presumptive mesoderm | 4.63e-07 | 315 |